RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 PLPP7Q8NBV4 271 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZFP28Q8NHY6 868 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 EXT2Q93063 718 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC2A13Q96QE2 648 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MENTQ9BUN1 341 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TKTL2Q9H0I9 626 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 WDR41Q9HAD4 459 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PARVBQ9HBI1 364 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TNFRSF12AQ9NP84 129 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TMLHEQ9NVH6 421 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CCDC167Q9P0B6 97 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GMIPQ9P107 970 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 DNAJB4Q9UDY4 337 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TLK1Q9UKI8 766 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PCOLCE2Q9UKZ9 415 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TTC3P53804 2025 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CEP290O15078 2479 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 VILLO15195 856 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TPST1O60507 370 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 B4GALT3O60512 393 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 VAPBO95292 243 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OXSR1O95747 527 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SBK3P0C264 359 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRPAP1P30533 357 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GLUD2P49448 558 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SERPINB8P50452 374 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 DAOAP59103 153 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PRAMEP78395 509 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 C17orf67Q0P5P2 114 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PRKG2Q13237 762 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CCINQ13939 588 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GEN1Q17RS7 908 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FSCBQ5H9T9 825 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RWDD4Q6NW29 188 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ZNF554Q86TJ5 538 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LDB1Q86U70 411 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CEP97Q8IW35 865 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FSTL5Q8N475 847 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TOP6BLQ8N6T0 577 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CNTD1Q8N815 330 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 OR9I1Q8NGQ6 314 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ABTB1Q969K4 478 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 NT5C3BQ969T7 300 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 HDAC11Q96DB2 347 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PHF21BQ96EK2 531 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MRPL1Q9BYD6 325 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 XPR1Q9UBH6 696 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ERVK-19Q9WJR5 959 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 DFFAO00273 331 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MAGEB3O15480 346 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GRID2O43424 1007 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRIG2O94898 1065 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 URODP06132 367 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 MYL4P12829 197 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GABRB3P28472 473 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LIMK2P53671 638 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 BHLHA9Q7RTU4 235 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 NATD1Q8N6N6 113 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RAB3IL1Q8TBN0 382 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ASB16Q96NS5 453 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CPNE1Q99829 537 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 FERMT1Q9BQL6 677 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 VCX3AQ9NNX9 186 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 EPS15L1Q9UBC2 864 aa11.56□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TET1Q8NFU7 2136 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 ARVCFO00192 962 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 UGT1A6P19224 532 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 WARSP23381 471 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CNTFP26441 200 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CHRNA4P43681 627 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RPL14P50914 215 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LSAMPQ13449 338 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SEPT6Q14141 434 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PAFAH1B3Q15102 231 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GRTP1Q5TC63 336 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SDHAF4Q5VUM1 108 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SLC24A5Q71RS6 500 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRRC8DQ7L1W4 858 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 BNIPLQ7Z465 357 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 TAC4Q86UU9 113 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 METTL23Q86XA0 190 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SCN4BQ8IWT1 228 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CPNE9Q8IYJ1 553 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 GPR152Q8TDT2 470 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 EME1Q96AY2 570 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PRICKLE1Q96MT3 831 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CAAP1Q9H8G2 361 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 LRRC40Q9H9A6 602 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CNGB3Q9NQW8 809 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 PSMD13Q9UNM6 376 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 SNX13Q9Y5W8 968 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 CASP8AP2Q9UKL3 1982 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 RGSL1A5PLK6 1076 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 HACD1B0YJ81 288 aa11.55□□□□□ -0.56
CDK5RAP3-231ENST00000584063 DLX3O60479 287 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms