RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ETNK1Q9HBU6 452 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 TRIM39Q9HCM9 518 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 SPATS2LQ9NUQ6 558 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 TAAR2Q9P1P5 351 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 PAK5Q9P286 719 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 ATXN10Q9UBB4 475 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 CLCA2Q9UQC9 943 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 PCYT1BQ9Y5K3 369 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 PTPRBP23467 1997 aa12.48□□□□□ -0.41
SMARCE1-218ENST00000582955 GRID2O43424 1007 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 NUAK1O60285 661 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 NOBOXO60393 691 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A9O60656 530 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 DNAJC6O75061 913 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 PPFIA2O75334 1257 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 MTX2O75431 263 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ZSCAN5DPP0CG00 497 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ACP5P13686 325 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ZNF8P17098 575 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 TPH1P17752 444 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A6P19224 532 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A1P22309 533 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A4P22310 534 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A3P35503 534 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A5P35504 534 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 FDFT1P37268 417 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 TMPRSS15P98073 1019 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 PDE1BQ01064 536 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 TARDBPQ13148 414 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 BIRC2Q13490 618 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 PEX6Q13608 980 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ITGA9Q13797 1035 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 LRP8Q14114 963 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 SEPT6Q14141 434 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 C14orf28Q4W4Y0 310 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 DRICH1Q6PGQ1 229 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 OGFOD3Q6PK18 319 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 CRTC3Q6UUV7 619 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ADGRG6Q86SQ4 1221 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 OR6C4Q8NGE1 309 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 GATA6Q92908 595 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 CCDC74AQ96AQ1 378 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 MS4A14Q96JA4 679 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 VPS35Q96QK1 796 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 CCDC3Q9BQI4 270 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A7Q9HAW7 530 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A10Q9HAW8 530 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 UGT1A8Q9HAW9 530 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ARNT2Q9HBZ2 717 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 HOMER3Q9NSC5 361 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 PIH1D1Q9NWS0 290 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 KCTD3Q9Y597 815 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 ST14Q9Y5Y6 855 aa12.47□□□□□ -0.41
SMARCE1-218ENST00000582955 USP27XA6NNY8 438 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 ERI2A8K979 691 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 GPR39O43194 453 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 VEGFDO43915 354 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 CDK14O94921 469 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 PRAMEF1O95521 474 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 GAS8O95995 478 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 MT-CO3P00414 261 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 RPL22P35268 128 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 KCNJ1P48048 391 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 MAZP56270 477 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 GTF2H3Q13889 308 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 POU6F1Q14863 301 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 PLA2G4EQ3MJ16 856 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 KHDC1Q4VXA5 237 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 LINC00523Q86TU6 105 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 DNAAF3Q8N9W5 541 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 GLIS1Q8NBF1 620 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 OR52K1Q8NGK4 314 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 OR13C4Q8NGS5 318 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 PATE1Q8WXA2 126 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 TTC25Q96NG3 672 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 FKBPLQ9UIM3 349 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 APPL1Q9UKG1 709 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 TMPRSS11EQ9UL52 423 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 PYCARDQ9ULZ3 195 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 KCNK6Q9Y257 313 aa12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 DRG1Q9Y295 367 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-218ENST00000582955 CEP295Q9C0D2 2601 aa12.46□□□□□ -0.42
SMARCE1-218ENST00000582955 PLXNB3Q9ULL4 1909 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 GPR89AB7ZAQ6 455 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 GAPDHSO14556 408 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 SNX2O60749 519 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 SRP72O76094 671 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 ECEL1O95672 775 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 APRTP07741 180 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 GPR89BP0CG08 455 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 GLB1P16278 677 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 HADHAP40939 763 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF140P52738 457 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 TMEM115Q12893 351 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-218ENST00000582955 MSLNQ13421 630 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms