RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ANKRD20A1Q5TYW2 823 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 ANKRD20A3Q5VUR7 823 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 CHST15Q7LFX5 561 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-220ENST00000581707 TTC13Q8NBP0 860 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 SNIP1Q8TAD8 396 aaKnown RBP19.31■□□□□ 0.68
SREBF1-220ENST00000581707 GLYATL1Q969I3 302 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 ZNF578Q96N58 590 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-220ENST00000581707 OR2AG1Q9H205 316 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 CARD9Q9H257 536 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 TRIM39Q9HCM9 518 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 ARFGAP3Q9NP61 516 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 ATXN10Q9UBB4 475 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 CAPN6Q9Y6Q1 641 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 SCN8AQ9UQD0 1980 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 NBEAQ8NFP9 2946 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 TMX2-CTNND1H3BSU7 103 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 GRID2O43424 1007 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 NUAK1O60285 661 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 ZNF189O75820 626 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-220ENST00000581707 AGTP01019 485 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 ZNF8P17098 575 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-220ENST00000581707 INHBCP55103 352 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 B4GALNT1Q00973 533 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 PRPSAP1Q14558 356 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 ZNF648Q5T619 568 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-220ENST00000581707 ZNF438Q7Z4V0 828 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 B3GNT8Q7Z7M8 397 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 TTC30BQ8N4P2 665 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 WDR36Q8NI36 951 aaKnown RBP19.3■□□□□ 0.68
SREBF1-220ENST00000581707 BLOC1S5Q8TDH9 187 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 HES6Q96HZ4 224 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 TMEM74Q96NL1 305 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 PLEKHG4BQ96PX9 1271 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 GORASP1Q9BQQ3 440 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 FOXP3Q9BZS1 431 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 TSGA10Q9BZW7 698 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 ATXN7L1Q9ULK2 861 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-220ENST00000581707 LHX6Q9UPM6 363 aa19.3■□□□□ 0.68
SREBF1-220ENST00000581707 AAR2Q9Y312 384 aaKnown RBP19.3■□□□□ 0.68
SREBF1-220ENST00000581707 CCDC187A0A096LP49 1063 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 RRP8O43159 456 aaKnown RBP19.29■□□□□ 0.68
SREBF1-220ENST00000581707 ZW10O43264 779 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 B4GAT1O43505 415 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 KRT86O43790 486 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 ACP5P13686 325 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 PSMB4P28070 264 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 RBMS1P29558 406 aaKnown RBP19.29■□□□□ 0.68
SREBF1-220ENST00000581707 ALDH4A1P30038 563 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 GPR3P46089 330 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 OR1D5P58170 312 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 ERVPABLB-1P60509 514 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 COL28A1Q2UY09 1125 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 ZDHHC20Q5W0Z9 365 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 IGF2-ASQ6U949 168 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 LRRC69Q6ZNQ3 347 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 GLT6D1Q7Z4J2 308 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 ADGRG6Q86SQ4 1221 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 PHYKPLQ8IUZ5 450 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 CCDC110Q8TBZ0 833 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 LIN37Q96GY3 246 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-220ENST00000581707 SPATA13Q96N96 652 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 SLC46A1Q96NT5 459 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 FICDQ9BVA6 458 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 STRADBQ9C0K7 418 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 EPB41L5Q9HCM4 733 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 IL17CQ9P0M4 197 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 GUCA1BQ9UMX6 200 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 PCDHGA8Q9Y5G5 932 aa19.29■□□□□ 0.68
SREBF1-220ENST00000581707 TRBV23OR9-2A0A075B6M9 112 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 GPR89AB7ZAQ6 455 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 PPM1DO15297 605 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 ARHGAP6O43182 974 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 GPR89BP0CG08 455 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 NR1D2Q14995 579 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 ATP13A5Q4VNC0 1218 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 FOXR1Q6PIV2 292 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 RANBP10Q6VN20 620 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 CCDC112Q8NEF3 446 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 PRR11Q96HE9 360 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-220ENST00000581707 VPS35Q96QK1 796 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 IL26Q9NPH9 171 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 ASCL3Q9NQ33 180 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 THSD1Q9NS62 852 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.28■□□□□ 0.68
SREBF1-220ENST00000581707 TBC1D29Q9UFV1 150 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 KCNK6Q9Y257 313 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 PKP3Q9Y446 797 aa19.28■□□□□ 0.68
SREBF1-220ENST00000581707 C5orf60A6NFR6 353 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 BUD23O43709 281 aaKnown RBP19.27■□□□□ 0.68
SREBF1-220ENST00000581707 VEGFDO43915 354 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 EML2O95834 649 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 CCKBRP32239 447 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 ADRA1AP35348 466 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 SPAM1P38567 509 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 ZFP36L1Q07352 338 aaKnown RBP19.27■□□□□ 0.68
SREBF1-220ENST00000581707 KLF1Q13351 362 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-220ENST00000581707 AMZ1Q400G9 498 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 PIM3Q86V86 326 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 DTX3LQ8TDB6 740 aa19.27■□□□□ 0.68
SREBF1-220ENST00000581707 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms