RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 A0A1W2PRQ8 180 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 GTPBP10A4D1E9 387 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 TCAF2A6NFQ2 919 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 KCNU1A8MYU2 1149 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 FOXO6A8MYZ6 492 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PPP1R3GB7ZBB8 358 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 RASA4BC9J798 803 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 INAFM1C9JVW0 142 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 F5H5T6 163 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 H0Y3Z8 333 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PDLIM1O00151 329 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PDE2AO00408 941 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PCDH17O14917 1159 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CHUKO15111 745 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 RASA4O43374 803 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SGTAO43765 313 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 AHCYL1O43865 530 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 B3GALNT1O75752 331 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 IPO13O94829 963 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ZWINTO95229 277 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SIX3O95343 332 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SLU7O95391 586 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 VNN1O95497 513 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 STAMBPO95630 424 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 FGFR1OPO95684 399 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 POP4O95707 220 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 F13A1P00488 732 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 APOEP02649 317 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 FUCA1P04066 466 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 HOXC4P09017 264 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 RBP3P10745 1247 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SPTBP11277 2137 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 FGF5P12034 268 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 LCP1P13796 627 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CD58P19256 250 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SYT1P21579 422 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 KELP23276 732 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 GJB2P29033 226 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 GKP32189 559 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 TSFMP43897 325 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ARCN1P48444 511 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SEPHS1P49903 392 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CYP2J2P51589 502 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CLCN6P51797 869 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ZNF75DP51815 510 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CASP5P51878 434 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CCNHP51946 323 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 AP3M2P53677 418 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CASP6P55212 293 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 DAOAP59103 153 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 TUBA4AP68366 448 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 TUBB4BP68371 445 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 KRT85P78386 507 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CTBSQ01459 385 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 DMPKQ09013 629 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 INCA1Q0VD86 236 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ADIGQ0VDE8 80 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ILF3Q12906 894 aaKnown RBP eCLIP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 MTM1Q13496 603 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PEX6Q13608 980 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CUL4BQ13620 913 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ALCAMQ13740 583 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 MYBPC3Q14896 1274 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PRKD1Q15139 912 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 HIF1AQ16665 826 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 TMEM52BQ4KMG9 183 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 BOLA3Q53S33 107 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 LRRC73Q5JTD7 316 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 RABGAP1LQ5R372 815 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 KAZNQ674X7 775 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SPOPLQ6IQ16 392 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 FBXL22Q6P050 247 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SLC30A9Q6PML9 568 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SARM1Q6SZW1 724 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 FAM180AQ6UWF9 173 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 NEK10Q6ZWH5 1172 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CIR1Q86X95 450 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PPP1R3BQ86XI6 285 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PLXDC1Q8IUK5 500 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 WDR75Q8IWA0 830 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SIX6OS1Q8N1H7 587 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CBARPQ8N350 705 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 GALNT16Q8N428 558 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 RYBPQ8N488 228 aaPredicted RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 DNAAF3Q8N9W5 541 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 IQUBQ8NA54 791 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 XXYLT1Q8NBI6 393 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SPC24Q8NBT2 197 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 UBA3Q8TBC4 463 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 CCDC110Q8TBZ0 833 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 ACMSDQ8TDX5 336 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 DQX1Q8TE96 717 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 PARD3BQ8TEW8 1205 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 COG1Q8WTW3 980 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 SPOCK2Q92563 424 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 LARP4BQ92615 738 aaKnown RBP2.4□□□□□ -2.03
SNORD53-201ENST00000579969 MR1Q95460 341 aa2.4□□□□□ -2.03
SNORD53-201ENST00000579969 DNAJC19Q96DA6 116 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms