RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PRPSAP2O60256 369 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DPM1O60762 260 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DNAJC6O75061 913 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SPAG6O75602 509 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RASSF9O75901 435 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RNF8O76064 485 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 UBXN7O94888 489 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PDGFAP04085 211 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TPM2P07951 284 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 AMD1P17707 334 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DCTP40126 519 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SEPHS1P49903 392 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CLCNKAP51800 687 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 EPHB1P54762 984 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CDH6P55285 790 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PTSQ03393 145 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CAMK4Q16566 473 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 UGT8Q16880 541 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 HSP90AA4PQ58FG1 418 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TCP11X2Q5H9J9 407 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PPP6R3Q5H9R7 873 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TMEM26Q6ZUK4 368 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 BPHLQ86WA6 291 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NPWQ8N729 165 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FNIP1Q8TF40 1166 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PIH1D2Q8WWB5 315 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZDHHC12Q96GR4 267 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 KCTD15Q96SI1 283 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TBC1D10AQ9BXI6 508 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 BRD8Q9H0E9 1235 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ACTL8Q9H568 366 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PDE7BQ9NP56 450 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NLRC4Q9NPP4 1024 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SLAMF7Q9NQ25 335 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CASS4Q9NQ75 786 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FAM207AQ9NSI2 230 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SEPT11Q9NVA2 429 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 KCNK6Q9Y257 313 aa12.06□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TNRC6AQ8NDV7 1962 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 A0A0J9YYE9 177 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TTC24A2A3L6 582 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 WIPF3A6NGB9 483 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GPR89AB7ZAQ6 455 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SNX2O60749 519 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DNAJB5O75953 348 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 VIPP01282 170 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TRBC1P01850 177 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GPR89BP0CG08 455 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ATP1A3P13637 1013 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ACP5P13686 325 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CTPS1P17812 591 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 XRCC1P18887 633 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CES1P23141 567 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PSMA2P25787 234 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MMP13P45452 471 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 STC1P52823 247 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GFERP55789 205 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RPS15P62841 145 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 UBE2IP63279 158 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CHRNA6Q15825 494 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CA9Q16790 459 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 EIF2S3LQ2VIR3 472 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FKBP15Q5T1M5 1219 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZNF787Q6DD87 383 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PRSS42Q7Z5A4 293 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SYVN1Q86TM6 617 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TMEM135Q86UB9 458 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LRRC49Q8IUZ0 686 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TRIM48Q8IWZ4 208 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RBM12BQ8IXT5 1001 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 AOPEPQ8N6M6 819 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TGM7Q96PF1 710 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SNRNP25Q9BV90 132 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RIOK2Q9BVS4 552 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CARD9Q9H257 536 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PARVAQ9NVD7 372 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 HAUS2Q9NVX0 235 aa12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RCOR3Q9P2K3 495 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DCHS2Q6V1P9 2916 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZNF106Q9H2Y7 1883 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CNTRLQ7Z7A1 2325 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RGSL1A5PLK6 1076 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TCP11X1B4DZS4 312 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GRID2O43424 1007 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NUAK1O60285 661 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PEX11BO96011 259 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ATP1A1P05023 1023 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CCDC172P0C7W6 258 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CA4P22748 312 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ELAVL4P26378 380 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TNFRSF8P28908 595 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SERPINB6P35237 376 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ARL4AP40617 200 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SH3BP2P78314 561 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PDE1BQ01064 536 aa12.04□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DPYSQ14117 519 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms