RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 UPB1Q9UBR1 384 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 L1RE1Q9UN81 338 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 HYKKA2RU49 373 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 L7N2F9 121 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 OR1I1O60431 355 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 VIPP01282 170 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 C9P02748 559 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 FAM86B2P0C5J1 330 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 ZNF806P0C7X5 589 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 PGAM2P15259 253 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 L1CAMP32004 1257 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 GRK5P34947 590 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 TIE1P35590 1138 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 VAMP2P63027 116 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 MBTD1Q05BQ5 628 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 TLR1Q15399 786 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 PFKFB4Q16877 469 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 HSDL2Q6YN16 418 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 GDPGP1Q6ZNW5 385 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 ABRAQ8N0Z2 381 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 ACTL9Q8TC94 416 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 PIH1D2Q8WWB5 315 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 CNDP2Q96KP4 475 aaKnown RBP5.1□□□□□ -1.59
NF1-219ENST00000579081 ULBP1Q9BZM6 244 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 OR2B2Q9GZK3 357 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 POPDC2Q9HBU9 364 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 BPIFA1Q9NP55 256 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 NAALADL1Q9UQQ1 740 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 RPTORQ8N122 1335 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 FAM237AA0A1B0GTK4 181 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 PDHXO00330 501 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 FGF10O15520 208 aaPredicted RBP5.1□□□□□ -1.59
NF1-219ENST00000579081 CHST10O43529 356 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 UBOX5O94941 541 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 HMGCRP04035 888 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 ASGR1P07306 291 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 SAGP10523 405 aaPredicted RBP5.1□□□□□ -1.59
NF1-219ENST00000579081 INSRRP14616 1297 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 ECHS1P30084 290 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 CAP2P40123 477 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 HNRNPFP52597 415 aaKnown RBP5.1□□□□□ -1.59
NF1-219ENST00000579081 CAV3P56539 151 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 MED22Q15528 200 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 TEAD4Q15561 434 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 CRTC3Q6UUV7 619 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 QSOX2Q6ZRP7 698 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 SLC41A1Q8IVJ1 513 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 BEND7Q8N7W2 519 aaPredicted RBP5.1□□□□□ -1.59
NF1-219ENST00000579081 VANGL1Q8TAA9 524 aaPredicted RBP5.1□□□□□ -1.59
NF1-219ENST00000579081 CD101Q93033 1021 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 AP1S3Q96PC3 154 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 PLEKHG4BQ96PX9 1271 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 MND1Q9BWT6 205 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 MEMO1Q9Y316 297 aa5.1□□□□□ -1.59
NF1-219ENST00000579081 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 WASHC1A8K0Z3 465 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 WASH3PC4AMC7 463 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 KERAO60938 352 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 CABYRO75952 493 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 ATP6V1G2O95670 118 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 CST1P01037 141 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 APODP05090 189 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 COX4I1P13073 169 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 EIF4BP23588 611 aaKnown RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 PTPN9P43378 593 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 CLCN5P51795 746 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 TAS2R50P59544 299 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 ERVK-9P63128 1117 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 SLC6A3Q01959 620 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 CCNJQ5T5M9 372 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 WASH2PQ6VEQ5 465 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 TCP10LQ8TDR4 215 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 PPP1R13LQ8WUF5 828 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 PMEPA1Q969W9 287 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 VRK1Q99986 396 aaPredicted RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 TRAF4Q9BUZ4 470 aaPredicted RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 IMP3Q9NV31 184 aaKnown RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 SAGE1Q9NXZ1 904 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 PLAGL2Q9UPG8 496 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 ERVK-11Q9UQG0 969 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 SAMHD1Q9Y3Z3 626 aaKnown RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 KCNE2Q9Y6J6 123 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 ATRNO75882 1429 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 ARHGAP23Q9P227 1491 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 DCXO43602 365 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 HCN1O60741 890 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 UGT2B17O75795 530 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 HSD3B1P14060 373 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 ZNF823P16415 610 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 PTBP1P26599 531 aaKnown RBP eCLIP5.09□□□□□ -1.592e-6■■■□□ 15.8
NF1-219ENST00000579081 VPS26BQ4G0F5 336 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 TMEM31Q5JXX7 168 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 TMC3Q7Z5M5 1100 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 CENPSQ8N2Z9 138 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 HJURPQ8NCD3 748 aaPredicted RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 TCEAL3Q969E4 200 aa5.09□□□□□ -1.59
NF1-219ENST00000579081 PTCD3Q96EY7 689 aaKnown RBP5.09□□□□□ -1.59
NF1-219ENST00000579081 PANX1Q96RD7 426 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms