RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 ZNF106Q9H2Y7 1883 aaKnown RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 ADAMTS20P59510 1910 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 A0A1W2PQM1 296 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 D6RAR5 112 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 F5H423 210 aaPredicted RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 CHUKO15111 745 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 BRINP1O60477 761 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 ECEL1O95672 775 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 SLC4A1P02730 911 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 RPLP0P05388 317 aaKnown RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 PSMB4P28070 264 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 ADRA1AP35348 466 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 MLLT3P42568 568 aaPredicted RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 GPR3P46089 330 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 CLCNKAP51800 687 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 GABREP78334 506 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 B4GALNT1Q00973 533 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 CLPPQ16740 277 aaPredicted RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 SEL1L2Q5TEA6 688 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 GLT6D1Q7Z4J2 308 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 SFTPA2Q8IWL1 248 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 LRRC8AQ8IWT6 810 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 SLC35B2Q8TB61 432 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 FGF11Q92914 225 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 LIN37Q96GY3 246 aaPredicted RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 ZNF578Q96N58 590 aaPredicted RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 TMEM74Q96NL1 305 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 FAM118BQ9BPY3 351 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 C19orf43Q9BQ61 176 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 FICDQ9BVA6 458 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 FRMD8P1Q9BZ68 369 aaPredicted RBP14.69□□□□□ -0.06
SS18-212ENST00000579061 ATXN10Q9UBB4 475 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 PLEKHM1Q9Y4G2 1056 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 PCDHGA8Q9Y5G5 932 aa14.69□□□□□ -0.06
SS18-212ENST00000579061 A0A087WV48 116 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 CCDC187A0A096LP49 1063 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 RHPN2P1A8MT19 583 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 GRID2O43424 1007 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 NRDCO43847 1150 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 VEGFDO43915 354 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 AGTP01019 485 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 CCDC175P0C221 793 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 CCKBRP32239 447 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 SPAM1P38567 509 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 FASLGP48023 281 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 PDX1P52945 283 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 MAZP56270 477 aaKnown RBP14.68□□□□□ -0.06
SS18-212ENST00000579061 ERVPABLB-1P60509 514 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 EIF3IQ13347 325 aaKnown RBP14.68□□□□□ -0.06
SS18-212ENST00000579061 TBC1D25Q3MII6 688 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 CHST15Q7LFX5 561 aaPredicted RBP14.68□□□□□ -0.06
SS18-212ENST00000579061 ADGRG6Q86SQ4 1221 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 WDR36Q8NI36 951 aaKnown RBP14.68□□□□□ -0.06
SS18-212ENST00000579061 CCDC110Q8TBZ0 833 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 BLOC1S5Q8TDH9 187 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 LRRC45Q96CN5 670 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 ATXN7L3BQ96GX2 97 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 OR2AG1Q9H205 316 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 SYNDIG1Q9H7V2 258 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 ARNT2Q9HBZ2 717 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 BPIFA1Q9NP55 256 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 FEZ2Q9UHY8 353 aaPredicted RBP14.68□□□□□ -0.06
SS18-212ENST00000579061 PKP3Q9Y446 797 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 PCYT1BQ9Y5K3 369 aaPredicted RBP14.68□□□□□ -0.06
SS18-212ENST00000579061 CFAP47Q6ZTR5 3102 aa14.68□□□□□ -0.06
SS18-212ENST00000579061 CASC3O15234 703 aaKnown RBP14.67□□□□□ -0.06
SS18-212ENST00000579061 TLX3O43711 291 aaPredicted RBP14.67□□□□□ -0.06
SS18-212ENST00000579061 MPOP05164 745 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 SLC2A4P14672 509 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 ZNF8P17098 575 aaPredicted RBP14.67□□□□□ -0.06
SS18-212ENST00000579061 BIRC2Q13490 618 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 ITGA9Q13797 1035 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 TAF1AQ15573 450 aaPredicted RBP14.67□□□□□ -0.06
SS18-212ENST00000579061 PARP6Q2NL67 630 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 ATP13A5Q4VNC0 1218 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 MEI1Q5TIA1 1274 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 ARHGEF18Q6ZSZ5 1173 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 Q8N9G6 341 aaPredicted RBP14.67□□□□□ -0.06
SS18-212ENST00000579061 BRSK1Q8TDC3 778 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 ALS2CR12Q96Q35 445 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 STRADBQ9C0K7 418 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 IL26Q9NPH9 171 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 TMPRSS11EQ9UL52 423 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 SATB2Q9UPW6 733 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 FAM208BQ5VWN6 2430 aa14.67□□□□□ -0.06
SS18-212ENST00000579061 CHD6Q8TD26 2715 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 GLYATL1P3A0A0U1RQE8 302 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 OR5K4A6NMS3 321 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 C2orf81A6NN90 581 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 KMOO15229 486 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 STX7O15400 261 aaKnown RBP14.66□□□□□ -0.06
SS18-212ENST00000579061 PSMD3O43242 534 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 B4GAT1O43505 415 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 CPNE6O95741 557 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 LPOP22079 712 aaPredicted RBP14.66□□□□□ -0.06
SS18-212ENST00000579061 STIP1P31948 543 aaKnown RBP14.66□□□□□ -0.06
SS18-212ENST00000579061 EIF2S3P41091 472 aaKnown RBP14.66□□□□□ -0.06
SS18-212ENST00000579061 INHBCP55103 352 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 CCZ1BP86790 482 aa14.66□□□□□ -0.06
SS18-212ENST00000579061 CCZ1P86791 482 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms