RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PCYT1BQ9Y5K3 369 aaPredicted RBP12.55□□□□□ -0.4
TVP23B-204ENST00000571018 GPR89AB7ZAQ6 455 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 NUDT21O43809 227 aaKnown RBP12.54□□□□□ -0.4
TVP23B-204ENST00000571018 NUAK1O60285 661 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 TCEA3O75764 348 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 GPR89BP0CG08 455 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 PNLIPP16233 465 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 SPAM1P38567 509 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 ACTR1BP42025 376 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 ACTR1AP61163 376 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 OLIG2Q13516 323 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 RTP5Q14D33 572 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 TAF1AQ15573 450 aaPredicted RBP12.54□□□□□ -0.4
TVP23B-204ENST00000571018 P3H1Q32P28 736 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 ATP13A5Q4VNC0 1218 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 CERCAMQ5T4B2 595 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 DENND5AQ6IQ26 1287 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 SLC30A9Q6PML9 568 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 PHYKPLQ8IUZ5 450 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 NAGSQ8N159 534 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 BRSK1Q8TDC3 778 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 ZDHHC1Q8WTX9 485 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 C1orf54Q8WWF1 131 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 CCDC74AQ96AQ1 378 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 LRRC45Q96CN5 670 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 DEPDC7Q96QD5 511 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 CCDC86Q9H6F5 360 aaKnown RBP12.54□□□□□ -0.4
TVP23B-204ENST00000571018 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
TVP23B-204ENST00000571018 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 APPL1Q9UKG1 709 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 TMPRSS11EQ9UL52 423 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 ZMIZ1Q9ULJ6 1067 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 PRKAB1Q9Y478 270 aa12.54□□□□□ -0.4
TVP23B-204ENST00000571018 CACNA1BQ00975 2339 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 GLYATL1P3A0A0U1RQE8 302 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 C2orf81A6NN90 581 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 NTN3O00634 580 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 CHUKO15111 745 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 GPR37O15354 613 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 STX7O15400 261 aaKnown RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 PSMD3O43242 534 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 GRID2O43424 1007 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 BUD23O43709 281 aaKnown RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 VEGFDO43915 354 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 USP12O75317 370 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ECEL1O95672 775 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ZNF8P17098 575 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 LPOP22079 712 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 CYP4F3Q08477 520 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 SPARCL1Q14515 664 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 SIX1Q15475 284 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 CCNG2Q16589 344 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ZNF648Q5T619 568 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 CHST15Q7LFX5 561 aaPredicted RBP12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ADGRG6Q86SQ4 1221 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 PROSER1Q86XN7 944 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 GRAMD1AQ96CP6 724 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 NXPE2Q96DL1 559 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 C19orf43Q9BQ61 176 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 TBL1YQ9BQ87 522 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 OR2AG1Q9H205 316 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 LRRC40Q9H9A6 602 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ARFGAP3Q9NP61 516 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 LRIT1Q9P2V4 623 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 ARL5AQ9Y689 179 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 RNF215Q9Y6U7 377 aa12.53□□□□□ -0.4
TVP23B-204ENST00000571018 A0A1W2PQM1 296 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 GAPDHSO14556 408 aaPredicted RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 CASC3O15234 703 aaKnown RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 CDK14O94921 469 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 CRTAMO95727 393 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 AP2A1O95782 977 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 MAZP56270 477 aaKnown RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 PDE1BQ01064 536 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 SNX1Q13596 522 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 ITGA9Q13797 1035 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 SPIDRQ14159 915 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 PTPRCAPQ14761 206 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 CHRNA6Q15825 494 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 KHDC1Q4VXA5 237 aaKnown RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 DRICH1Q6PGQ1 229 aaPredicted RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 FAM151BQ6UXP7 276 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 ZNF438Q7Z4V0 828 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 REXO1L1PQ8IX06 675 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 PATE1Q8WXA2 126 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 ANP32BQ92688 251 aaKnown RBP12.52□□□□□ -0.41
TVP23B-204ENST00000571018 LRRN3Q9H3W5 708 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 ZKSCAN5Q9Y2L8 839 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 PCDHB1Q9Y5F3 818 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 SCN8AQ9UQD0 1980 aa12.52□□□□□ -0.41
TVP23B-204ENST00000571018 ERI2A8K979 691 aaKnown RBP12.51□□□□□ -0.41
TVP23B-204ENST00000571018 TAF4O00268 1085 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms