RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CLDN6P56747 220 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ACTR1AP61163 376 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 PDE1BQ01064 536 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 SPARCL1Q14515 664 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 CDCP2Q5VXM1 449 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 DENND5AQ6IQ26 1287 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 DRICH1Q6PGQ1 229 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 SLC30A9Q6PML9 568 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 PHYKPLQ8IUZ5 450 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 WDR48Q8TAF3 677 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ZDHHC1Q8WTX9 485 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 CCDC3Q9BQI4 270 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 IL26Q9NPH9 171 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ATXN10Q9UBB4 475 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 PLEKHM1Q9Y4G2 1056 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ST14Q9Y5Y6 855 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ARL5AQ9Y689 179 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 ACACAQ13085 2346 aa13.68□□□□□ -0.22
HERPUD1-218ENST00000569569 FRYQ5TBA9 3013 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 GLYATL1P3A0A0U1RQE8 302 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 TMEM8BA6NDV4 472 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 TRABD2BA6NFA1 517 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ERI2A8K979 691 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 GRID2O43424 1007 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 BUD23O43709 281 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 VEGFDO43915 354 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 AP2A1O95782 977 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 PNLIPP16233 465 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 GLB1P16278 677 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ZNF8P17098 575 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ITGA9Q13797 1035 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 HLTFQ14527 1009 aaKnown RBP eCLIP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 CHRNA6Q15825 494 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 LONRF2Q1L5Z9 754 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ATP13A5Q4VNC0 1218 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 C14orf28Q4W4Y0 310 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 FAM151BQ6UXP7 276 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 CHST15Q7LFX5 561 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ADGRG6Q86SQ4 1221 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 C17orf82Q86X59 251 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 DCBLD1Q8N8Z6 715 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 OR4K2Q8NGD2 314 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 PBKQ96KB5 322 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 C19orf43Q9BQ61 176 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 OR2AG1Q9H205 316 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ETNK1Q9HBU6 452 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ARFGAP3Q9NP61 516 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 HOMER3Q9NSC5 361 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 ASPMQ8IZT6 3477 aa13.67□□□□□ -0.22
HERPUD1-218ENST00000569569 CHUKO15111 745 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 NUDT21O43809 227 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 TCEA3O75764 348 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 CDK14O94921 469 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 TMEM115Q12893 351 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 PTPRCAPQ14761 206 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 CERCAMQ5T4B2 595 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 ZNF648Q5T619 568 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 LINC00523Q86TU6 105 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 SFTPA2Q8IWL1 248 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 NAGSQ8N159 534 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 TAB3Q8N5C8 712 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 CCDC89Q8N998 374 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 KDF1Q8NAX2 398 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 GDAP1Q8TB36 358 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 CCDC74AQ96AQ1 378 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 PAK5Q9P286 719 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 LRIT1Q9P2V4 623 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 APPL1Q9UKG1 709 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 TMPRSS11EQ9UL52 423 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 PRKAB1Q9Y478 270 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 PCYT1BQ9Y5K3 369 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 IGF2RP11717 2491 aa13.66□□□□□ -0.22
HERPUD1-218ENST00000569569 URB1O60287 2271 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 GAPDHSO14556 408 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 KMOO15229 486 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 KIF5CO60282 957 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 UGT1A9O60656 530 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 MTX2O75431 263 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 ECEL1O95672 775 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 ETS1P14921 441 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 UGT1A6P19224 532 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 UGT1A1P22309 533 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 UGT1A4P22310 534 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 UGT1A3P35503 534 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 UGT1A5P35504 534 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 HADHAP40939 763 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 LMAN1P49257 510 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 LDLRAP1Q5SW96 308 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 C4orf22Q6V702 233 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 SLC35F6Q8N357 371 aa13.65□□□□□ -0.22
HERPUD1-218ENST00000569569 RASGEF1CQ8N431 466 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms