RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 UGT8Q16880 541 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 CYB5D1Q6P9G0 228 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 PRSS42Q7Z5A4 293 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 TP53INP2Q8IXH6 220 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 RIOK2Q9BVS4 552 aaKnown RBP12.32□□□□□ -0.44
SNX29-207ENST00000568949 GPR87Q9BY21 358 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 BRD8Q9H0E9 1235 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 ACTL8Q9H568 366 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 NLRC4Q9NPP4 1024 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 LHX9Q9NQ69 397 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 LNPEPQ9UIQ6 1025 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 DNPEPQ9ULA0 475 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 CNOT6Q9ULM6 557 aaKnown RBP12.32□□□□□ -0.44
SNX29-207ENST00000568949 PRKAB1Q9Y478 270 aa12.32□□□□□ -0.44
SNX29-207ENST00000568949 A0A0J9YYE9 177 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 A0A0U1RQS6 177 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 TCP11X1B4DZS4 312 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 LRCH4O75427 683 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 UBXN7O94888 489 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 CLDN1O95832 211 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 TRBC1P01850 177 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 PDHA1P08559 390 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 XRCC1P18887 633 aaPredicted RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 PSMA2P25787 234 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 COL8A1P27658 744 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 SEPHS1P49903 392 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 MAXP61244 160 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 DPYSQ14117 519 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 EIF2S3LQ2VIR3 472 aaKnown RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 PPP6R3Q5H9R7 873 aaPredicted RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 TMEM26Q6ZUK4 368 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 PPP1R3BQ86XI6 285 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 MCOLN2Q8IZK6 566 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 ARFGAP1Q8N6T3 406 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 NSMCE1Q8WV22 266 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 KLHL6Q8WZ60 621 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 RNF31Q96EP0 1072 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 TGM7Q96PF1 710 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 FCRL4Q96PJ5 515 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 PLEKHG4BQ96PX9 1271 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 PEBP4Q96S96 227 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 ACSS2Q9NR19 701 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 FAM207AQ9NSI2 230 aaPredicted RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 CWC15Q9P013 229 aaKnown RBP12.31□□□□□ -0.44
SNX29-207ENST00000568949 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 ZNF451Q9Y4E5 1061 aa12.31□□□□□ -0.44
SNX29-207ENST00000568949 EPHB6O15197 1021 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 NUAK1O60285 661 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 MAFKO60675 156 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 LDLRP01130 860 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 TYRP1P17643 537 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 AMD1P17707 334 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 TNFRSF8P28908 595 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 PTPN4P29074 926 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 MMP13P45452 471 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 LEPRP48357 1165 aaKnown RBP12.3□□□□□ -0.44
SNX29-207ENST00000568949 KLK7P49862 253 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 MRPL49Q13405 166 aaKnown RBP12.3□□□□□ -0.44
SNX29-207ENST00000568949 MAMLD1Q13495 774 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 CHRNA6Q15825 494 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 MARC1Q5VT66 337 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 ACAD10Q6JQN1 1059 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 CYP4V2Q6ZWL3 525 aaPredicted RBP12.3□□□□□ -0.44
SNX29-207ENST00000568949 SYVN1Q86TM6 617 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 HPS6Q86YV9 775 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 PHYKPLQ8IUZ5 450 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 AOPEPQ8N6M6 819 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 ELMO2Q96JJ3 720 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 AGPAT1Q99943 283 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 CARD9Q9H257 536 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 ZWILCHQ9H900 591 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 SAMSN1Q9NSI8 373 aaKnown RBP12.3□□□□□ -0.44
SNX29-207ENST00000568949 TAB2Q9NYJ8 693 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 SLC30A1Q9Y6M5 507 aa12.3□□□□□ -0.44
SNX29-207ENST00000568949 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 H3BRJ5 948 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 GRID2O43424 1007 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 PRPSAP2O60256 369 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 DPM1O60762 260 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 CEACAM4O75871 244 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 RASSF9O75901 435 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 RNF8O76064 485 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 VIPP01282 170 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 NELFEP18615 380 aaKnown RBP12.29□□□□□ -0.44
SNX29-207ENST00000568949 MIPP30301 263 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 CCL11P51671 97 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 CDH6P55285 790 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 RPS15P62841 145 aaKnown RBP12.29□□□□□ -0.44
SNX29-207ENST00000568949 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 CACHD1Q5VU97 1274 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 CPZQ66K79 652 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 JMJD6Q6NYC1 403 aaPredicted RBP12.29□□□□□ -0.44
SNX29-207ENST00000568949 BPHLQ86WA6 291 aaPredicted RBP12.29□□□□□ -0.44
SNX29-207ENST00000568949 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 Q8NA96 180 aa12.29□□□□□ -0.44
SNX29-207ENST00000568949 ZDHHC12Q96GR4 267 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms