RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 MFSD11O43934 449 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 DNAJB5O75953 348 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 RARAP10276 462 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 ATP1A3P13637 1013 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 F3P13726 295 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 ZNF30P17039 623 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 GNLYP22749 145 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 NOP2P46087 812 aaKnown RBP15.3■□□□□ 0.04
PALB2-205ENST00000567003 LEPRP48357 1165 aaKnown RBP15.3■□□□□ 0.04
PALB2-205ENST00000567003 UBE2IP63279 158 aaKnown RBP15.3■□□□□ 0.04
PALB2-205ENST00000567003 MMRN1Q13201 1228 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 MAP7Q14244 749 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 FAM182AQ5T1J6 154 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 ZNF571Q7Z3V5 609 aaPredicted RBP15.3■□□□□ 0.04
PALB2-205ENST00000567003 NLRP8Q86W28 1048 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 CCDC13Q8IYE1 715 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 NDUFAF2Q8N183 169 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 TEX26Q8N6G2 289 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 LPCAT1Q8NF37 534 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 SH3KBP1Q96B97 665 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 C9orf72Q96LT7 481 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 OR6C1Q96RD1 312 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 TDRD1Q9BXT4 1180 aaKnown RBP15.3■□□□□ 0.04
PALB2-205ENST00000567003 OSGEPL1Q9H4B0 414 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 PCDH18Q9HCL0 1135 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 TLK1Q9UKI8 766 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 SLC30A1Q9Y6M5 507 aa15.3■□□□□ 0.04
PALB2-205ENST00000567003 LILRA5A6NI73 299 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 LRRC53A6NM62 1247 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 MKRN2OSH3BPM6 223 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 DDX3XO00571 662 aaKnown RBP eCLIP15.29■□□□□ 0.042e-9■■■□□ 16.8
PALB2-205ENST00000567003 KIF1CO43896 1103 aaKnown RBP15.29■□□□□ 0.04
PALB2-205ENST00000567003 RFPL1O75677 317 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 PRLP01236 227 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 PYGLP06737 847 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 CD48P09326 243 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 ANKRD34CP0C6C1 535 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 RNF224P0DH78 156 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 PCK1P35558 622 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 NIPAL4Q0D2K0 466 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 ASIC2Q16515 512 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 CRTC2Q53ET0 693 aaPredicted RBP15.29■□□□□ 0.04
PALB2-205ENST00000567003 HENMT1Q5T8I9 393 aaKnown RBP15.29■□□□□ 0.04
PALB2-205ENST00000567003 TCTN3Q6NUS6 607 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 CRTC3Q6UUV7 619 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 PLXDC1Q8IUK5 500 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 ANKRD20A12PQ8NF67 263 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 STAMBPL1Q96FJ0 436 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 PLEKHG4BQ96PX9 1271 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 RUFY1Q96T51 708 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.29■□□□□ 0.04
PALB2-205ENST00000567003 POLR1EQ9GZS1 481 aaKnown RBP15.29■□□□□ 0.04
PALB2-205ENST00000567003 HSD3B7Q9H2F3 369 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 HAUS4Q9H6D7 363 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 KLC4Q9NSK0 619 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 DTLQ9NZJ0 730 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 ATXN10Q9UBB4 475 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 POLHQ9Y253 713 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 PCDHB3Q9Y5E6 796 aa15.29■□□□□ 0.04
PALB2-205ENST00000567003 SHANK1Q9Y566 2161 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 KIR2DS5A0A0G2JLQ3 304 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 A0A0G2JNG1 304 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 KIR2DS3K7RE56 304 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 GRID2O43424 1007 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 NDUFA10O95299 355 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 C9P02748 559 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 ZNF8P17098 575 aaPredicted RBP15.28■□□□□ 0.04
PALB2-205ENST00000567003 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
PALB2-205ENST00000567003 SERPINB6P35237 376 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 SPINT3P49223 89 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 MYL5Q02045 173 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 KIR2DS5Q14953 304 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 SEPT7Q16181 437 aaKnown RBP15.28■□□□□ 0.04
PALB2-205ENST00000567003 PPP1R2P3Q6NXS1 205 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 RASGRP3Q8IV61 690 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 RSC1A1Q92681 617 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 TRIM55Q9BYV6 548 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 TWSG1Q9GZX9 223 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 RCOR3Q9P2K3 495 aaPredicted RBP15.28■□□□□ 0.04
PALB2-205ENST00000567003 PLEKHB1Q9UF11 243 aaPredicted RBP15.28■□□□□ 0.04
PALB2-205ENST00000567003 SLC23A2Q9UGH3 650 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 LNPEPQ9UIQ6 1025 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 SCINQ9Y6U3 715 aa15.28■□□□□ 0.04
PALB2-205ENST00000567003 MED13Q9UHV7 2174 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 PIPSLA2A3N6 862 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 NUAK1O60285 661 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 RASSF9O75901 435 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 UBXN7O94888 489 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 AGFG2O95081 481 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 TIAF1O95411 115 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 HLA-DQB2P05538 268 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 SLC2A4P14672 509 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 PMS2P54278 862 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 SLC25A11Q02978 314 aaKnown RBP15.27■□□□□ 0.04
PALB2-205ENST00000567003 KRT81Q14533 505 aa15.27■□□□□ 0.04
PALB2-205ENST00000567003 QPCTQ16769 361 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms