RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GPR63Q9BZJ6 419 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 ZMYND15Q9H091 742 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 SARS2Q9NP81 518 aaKnown RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 SHOC2Q9UQ13 582 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 ZNF711Q9Y462 761 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 PRKAB1Q9Y478 270 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 PCDHB11Q9Y5F2 797 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 PCYT1BQ9Y5K3 369 aaPredicted RBP19.97■□□□□ 0.79
CLN6-207ENST00000566347 CFAP46Q8IYW2 2715 aa19.97■□□□□ 0.79
CLN6-207ENST00000566347 C9orf172C9J069 976 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 MTSS1O43312 755 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 GRID2O43424 1007 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 CST8O60676 142 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 SLC25A14O95258 325 aaPredicted RBP19.96■□□□□ 0.79
CLN6-207ENST00000566347 NDST3O95803 873 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 PIRTP0C851 137 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 THRAP10827 490 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 ACP5P13686 325 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 PTPN3P26045 913 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 MAGEA1P43355 309 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 HHEXQ03014 270 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 TGIF1Q15583 401 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.96■□□□□ 0.79
CLN6-207ENST00000566347 TMC3Q7Z5M5 1100 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 PHYKPLQ8IUZ5 450 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 TRAM1L1Q8N609 369 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 AVL9Q8NBF6 648 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 AGBL5Q8NDL9 886 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 GPR26Q8NDV2 337 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 SPATA22Q8NHS9 363 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 SH3KBP1Q96B97 665 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 TRIM5Q9C035 493 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 TRIM39Q9HCM9 518 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 FOXJ2Q9P0K8 574 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 TBC1D29Q9UFV1 150 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 KCNK6Q9Y257 313 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 ALG6Q9Y672 507 aa19.96■□□□□ 0.79
CLN6-207ENST00000566347 TRBV23OR9-2A0A075B6M9 112 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 OR5K4A6NMS3 321 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 DUX1O43812 170 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 EML2O95834 649 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 MT-CYBP00156 380 aaPredicted RBP19.95■□□□□ 0.78
CLN6-207ENST00000566347 CCL4P13236 92 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 CSF2RBP32927 897 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 CSTF2P33240 577 aaKnown RBP eCLIP19.95■□□□□ 0.78
CLN6-207ENST00000566347 PPM1FP49593 454 aaPredicted RBP19.95■□□□□ 0.78
CLN6-207ENST00000566347 CLCNKAP51800 687 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 TFDP3Q5H9I0 405 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 ALS2CLQ60I27 953 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 TMEM71Q6P5X7 295 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 IYDQ6PHW0 289 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 SPOCD1Q6ZMY3 1216 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 SLC9B2Q86UD5 537 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 ZFAND4Q86XD8 727 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 ZNF843Q8N446 348 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 TC2NQ8N9U0 490 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 P3H4Q92791 437 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 TAAR9Q96RI9 348 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 OR2AG1Q9H205 316 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 LUC7LQ9NQ29 371 aaKnown RBP19.95■□□□□ 0.78
CLN6-207ENST00000566347 ATXN10Q9UBB4 475 aa19.95■□□□□ 0.78
CLN6-207ENST00000566347 KIR2DS5A0A0G2JLQ3 304 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 A0A0G2JNG1 304 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.94■□□□□ 0.78
CLN6-207ENST00000566347 KIR2DS3K7RE56 304 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 PMPCBO75439 489 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 LCA5LO95447 670 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 SLC4A1P02730 911 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 F3P13726 295 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 ZNF8P17098 575 aaPredicted RBP19.94■□□□□ 0.78
CLN6-207ENST00000566347 TNNT3P45378 269 aaPredicted RBP19.94■□□□□ 0.78
CLN6-207ENST00000566347 KIR2DS5Q14953 304 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 MANEAQ5SRI9 462 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 FAM182AQ5T1J6 154 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 KIAA1614Q5VZ46 1190 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 KAZNQ674X7 775 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 B4GALNT4Q76KP1 1039 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 DTX1Q86Y01 620 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 CCDC170Q8IYT3 715 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 KATNAL2Q8IYT4 538 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 RCOR2Q8IZ40 523 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 GLYATL1Q969I3 302 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.94■□□□□ 0.78
CLN6-207ENST00000566347 PDP2Q9P2J9 529 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 SAE1Q9UBE0 346 aaPredicted RBP19.94■□□□□ 0.78
CLN6-207ENST00000566347 FAM153AQ9UHL3 310 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.94■□□□□ 0.78
CLN6-207ENST00000566347 PCDHGA3Q9Y5H0 932 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 ADGRG1Q9Y653 693 aa19.94■□□□□ 0.78
CLN6-207ENST00000566347 HELZ2Q9BYK8 2649 aaKnown RBP19.94■□□□□ 0.78
CLN6-207ENST00000566347 COL6A6A6NMZ7 2263 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 A6NCN8 305 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 STMND1H3BQB6 276 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 EFSO43281 561 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 SNX2O60749 519 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 ZRANB2O95218 330 aaKnown RBP eCLIP19.93■□□□□ 0.78
CLN6-207ENST00000566347 FGF3P11487 239 aaPredicted RBP19.93■□□□□ 0.78
CLN6-207ENST00000566347 PECAM1P16284 738 aaPredicted RBP19.93■□□□□ 0.78
CLN6-207ENST00000566347 EPHA4P54764 986 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 WASHC5Q12768 1159 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms