RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 OR2AG1Q9H205 316 aa13.54□□□□□ -0.24
CNOT1-206ENST00000564557 LRRC40Q9H9A6 602 aa13.54□□□□□ -0.24
CNOT1-206ENST00000564557 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
CNOT1-206ENST00000564557 LRIT1Q9P2V4 623 aa13.54□□□□□ -0.24
CNOT1-206ENST00000564557 NFKBIL1Q9UBC1 381 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-206ENST00000564557 FEZ2Q9UHY8 353 aaPredicted RBP13.54□□□□□ -0.24
CNOT1-206ENST00000564557 CNOT6Q9ULM6 557 aaKnown RBP13.54□□□□□ -0.24
CNOT1-206ENST00000564557 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
CNOT1-206ENST00000564557 PLXNB3Q9ULL4 1909 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GPR89AB7ZAQ6 455 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 E7EVH7 732 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GRID2O43424 1007 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 NUAK1O60285 661 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GAS8O95995 478 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GPR89BP0CG08 455 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 CYP4F3Q08477 520 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 SNX1Q13596 522 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 SPARCL1Q14515 664 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 TAF1AQ15573 450 aaPredicted RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 FAM151BQ6UXP7 276 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 RANBP10Q6VN20 620 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 NRROSQ86YC3 692 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 TTC30BQ8N4P2 665 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 MDM1Q8TC05 714 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 BRSK1Q8TDC3 778 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 C1orf54Q8WWF1 131 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 ATG4AQ8WYN0 398 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 ZCCHC2Q9C0B9 1178 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 NRSN2Q9GZP1 204 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 STN1Q9H668 368 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 ARFGAP3Q9NP61 516 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 IL17CQ9P0M4 197 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 ZMIZ1Q9ULJ6 1067 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 PRKAB1Q9Y478 270 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 PLEKHM1Q9Y4G2 1056 aa13.53□□□□□ -0.24
CNOT1-206ENST00000564557 OAS3Q9Y6K5 1087 aaKnown RBP13.53□□□□□ -0.24
CNOT1-206ENST00000564557 LIASO43766 372 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 NUDT21O43809 227 aaKnown RBP13.52□□□□□ -0.25
CNOT1-206ENST00000564557 VEGFDO43915 354 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 CEP104O60308 925 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 NOBOXO60393 691 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 SNX2O60749 519 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 DNAJC6O75061 913 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 USP12O75317 370 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 CDK14O94921 469 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 ECEL1O95672 775 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 RPLP0P05388 317 aaKnown RBP13.52□□□□□ -0.25
CNOT1-206ENST00000564557 ACP5P13686 325 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 SLC2A4P14672 509 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 PNLIPP16233 465 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 ADRA1AP35348 466 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 LONRF2Q1L5Z9 754 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 INSCQ1MX18 579 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 CERCAMQ5T4B2 595 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 GSTA5Q7RTV2 222 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 LINC00523Q86TU6 105 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 LRRTM4Q86VH4 590 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 CCNJLQ8IV13 435 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 TAB3Q8N5C8 712 aaPredicted RBP13.52□□□□□ -0.25
CNOT1-206ENST00000564557 VPS35Q96QK1 796 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 LRRN3Q9H3W5 708 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 IL26Q9NPH9 171 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 APPL1Q9UKG1 709 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 ACACBO00763 2458 aa13.52□□□□□ -0.25
CNOT1-206ENST00000564557 TRBV23OR9-2A0A075B6M9 112 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 TMX2-CTNND1H3BSU7 103 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 KMOO15229 486 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 METTL18O95568 372 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 FGGP02679 453 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ZNF8P17098 575 aaPredicted RBP13.51□□□□□ -0.25
CNOT1-206ENST00000564557 VCLP18206 1134 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ALDH4A1P30038 563 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 FDFT1P37268 417 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 HADHAP40939 763 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 GDF10P55107 478 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 MAZP56270 477 aaKnown RBP13.51□□□□□ -0.25
CNOT1-206ENST00000564557 CCL7P80098 99 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 TMEM115Q12893 351 aaPredicted RBP13.51□□□□□ -0.25
CNOT1-206ENST00000564557 HLTFQ14527 1009 aaKnown RBP eCLIP13.51□□□□□ -0.25
CNOT1-206ENST00000564557 CHRNA6Q15825 494 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 CCNG2Q16589 344 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ATP13A5Q4VNC0 1218 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ZNF648Q5T619 568 aaPredicted RBP13.51□□□□□ -0.25
CNOT1-206ENST00000564557 CRTC3Q6UUV7 619 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ADGRG6Q86SQ4 1221 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 ARL14Q8N4G2 192 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 DNAAF3Q8N9W5 541 aa13.51□□□□□ -0.25
CNOT1-206ENST00000564557 OR4K2Q8NGD2 314 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms