RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SLC1A6P48664 564 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 IFT88Q13099 833 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TXNDC11Q6PKC3 985 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 Q6ZVL8 140 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 NXPE1Q8N323 547 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ANKS4BQ8N8V4 417 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 RFWD2Q8NHY2 731 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 CSGALNACT1Q8TDX6 532 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 MOCOSQ96EN8 888 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 P2RY13Q9BPV8 354 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 PKD2L2Q9NZM6 624 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 KLHL14Q9P2G3 628 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 SUN2Q9UH99 717 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TMPRSS11EQ9UL52 423 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ITM2BQ9Y287 266 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ARL2BPQ9Y2Y0 163 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TRIOBPQ9H2D6 2365 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 A0A1W2PPC1 479 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 C2CD4DB7Z1M9 353 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 H3BMM5 538 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 K7EQS6 105 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 SPINT1O43278 529 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ZBTB14O43829 449 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TGDSO95455 350 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 HNRNPLP14866 589 aaKnown RBP eCLIP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ZNF7P17097 686 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TFEBP19484 476 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 CHRM3P20309 590 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.469e-8■■■■□ 25.4
COMMD4-208ENST00000563220 GRK2P25098 689 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ITGB7P26010 798 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 PPARGP37231 505 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ETV3P41162 512 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 WASP42768 502 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 KPNA2P52292 529 aaKnown RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TTC31Q49AM3 519 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 LYPLAL1Q5VWZ2 237 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ZDHHC20Q5W0Z9 365 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 NUDT18Q6ZVK8 323 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 MMAAQ8IVH4 418 aaKnown RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 RBFAQ8N0V3 343 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 SIDT2Q8NBJ9 832 aaKnown RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 GIMAP7Q8NHV1 300 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 C10orf82Q8WW14 230 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 KCNJ9Q92806 393 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 SCAMP4Q969E2 229 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 PTERQ96BW5 349 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 TTC1Q99614 292 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 GATA5Q9BWX5 397 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-208ENST00000563220 ACSS2Q9NR19 701 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 COMMD10Q9Y6G5 202 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 STON1Q9Y6Q2 735 aa17.9■□□□□ 0.46
COMMD4-208ENST00000563220 SCN8AQ9UQD0 1980 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 VPS26AO75436 327 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 FSBPO95073 299 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 RBP1P09455 135 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 NFKBIAP25963 317 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 PFKPQ01813 784 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 ENPP2Q13822 863 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 ERAP2Q6P179 960 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 KLC3Q6P597 504 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 LIPIQ6XZB0 460 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 TECPR1Q7Z6L1 1165 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 CLDN19Q8N6F1 224 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 CD200R1Q8TD46 325 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 CLPBQ9H078 707 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 ABCG8Q9H221 673 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 FAM83DQ9H4H8 585 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 ALG9Q9H6U8 611 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 KCNK13Q9HB14 408 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 SYTL2Q9HCH5 934 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 PCDHB1Q9Y5F3 818 aa17.89■□□□□ 0.45
COMMD4-208ENST00000563220 TCF20Q9UGU0 1960 aaKnown RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 NEMP2A6NFY4 417 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 PYGLP06737 847 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 TROVE2P10155 538 aaKnown RBP eCLIP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 GM2AP17900 193 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 KCNA5P22460 613 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 CLCN7P51798 805 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 ABCE1P61221 599 aaKnown RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 LIPMQ5VYY2 423 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 TXNDC5Q8NBS9 432 aaKnown RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 RMDN2Q96LZ7 410 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 SORT1Q99523 831 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 TRIM55Q9BYV6 548 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 DCTN4Q9UJW0 460 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 IKZF3Q9UKT9 509 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 TNFRSF4P43489 277 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 KIR2DL1P43626 348 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 SEC13P55735 322 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 PTRHD1Q6GMV3 140 aaKnown RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 FBXL19Q6PCT2 694 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 CRLF3Q8IUI8 442 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 CHPFQ8IZ52 775 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 ZNF513Q8N8E2 541 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 LKAAEAR1Q8TD35 194 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 LRCH3Q96II8 777 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 GAS2L1Q99501 681 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-208ENST00000563220 SPATA16Q9BXB7 569 aa17.88■□□□□ 0.45
COMMD4-208ENST00000563220 SARS2Q9NP81 518 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms