RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 HENMT1Q5T8I9 393 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 APTXQ7Z2E3 356 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 AOPEPQ8N6M6 819 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 MAML1Q92585 1016 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 C9orf72Q96LT7 481 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 FAM83DQ9H4H8 585 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 HAUS4Q9H6D7 363 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 LRRC4CQ9HCJ2 640 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 PRDM8Q9NQV8 689 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 AIPL1Q9NZN9 384 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 CNOT6Q9ULM6 557 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 KCNK6Q9Y257 313 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 PLAAQ9Y263 795 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 PCDHGA6Q9Y5G7 932 aa15.57■□□□□ 0.08
HERPUD1-205ENST00000562914 LRRC53A6NM62 1247 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 MATN3O15232 486 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 GRID2O43424 1007 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 RFPL1O75677 317 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 CLDN7O95471 211 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 GARSP41250 739 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 SPINT3P49223 89 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 UBE2IP63279 158 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 FOXM1Q08050 763 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 NIPA2Q8N8Q9 360 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 STAMBPL1Q96FJ0 436 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 ISCUQ9H1K1 167 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 ZNF768Q9H5H4 540 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 PCDH18Q9HCL0 1135 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 KLHL3Q9UH77 587 aa15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 OAS3Q9Y6K5 1087 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-205ENST00000562914 A0A0U1RQS6 177 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 C1orf232A0A0U1RR37 186 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 SNX2O60749 519 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 MTA2O94776 668 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 UBXN7O94888 489 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 CCNYL3P0C7X3 344 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 CCNCP24863 283 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 PMS2P54278 862 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 GALNT2Q10471 571 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 KRT81Q14533 505 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 STX1AQ16623 288 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 IFI16Q16666 785 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 C4orf17Q53FE4 359 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 CCDC122Q5T0U0 273 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 PDPK2PQ6A1A2 396 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 TMEM26Q6ZUK4 368 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 ASB18Q6ZVZ8 466 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 ZNF571Q7Z3V5 609 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 APLFQ8IW19 511 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 RBM12BQ8IXT5 1001 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 TSGA13Q96PP4 275 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 TBC1D10AQ9BXI6 508 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 PCDH9Q9HC56 1237 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 RAD18Q9NS91 495 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 MYO1AQ9UBC5 1043 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 CROTQ9UKG9 612 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 CHKBQ9Y259 395 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 PRKAB1Q9Y478 270 aa15.55■□□□□ 0.08
HERPUD1-205ENST00000562914 FADS2P1A8MWK0 482 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 C21orf140B9A014 251 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 DDX3XO00571 662 aaKnown RBP eCLIP15.54■□□□□ 0.083e-18■■■■□ 26.5
HERPUD1-205ENST00000562914 MTSS1O43312 755 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 VPS4BO75351 444 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 NDUFA10O95299 355 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 PRLP01236 227 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 VIPP01282 170 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 FGF5P12034 268 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 AMD1P17707 334 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 KLHL30Q0D2K2 578 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 PAFAH1B3Q15102 231 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 PRSS42Q7Z5A4 293 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 RASGRP3Q8IV61 690 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 TRIM48Q8IWZ4 208 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 FAM71BQ8TC56 605 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 FCRL4Q96PJ5 515 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 PLEKHG4BQ96PX9 1271 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 WDR24Q96S15 920 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 ZSCAN5AQ9BUG6 496 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 MLPHQ9BV36 600 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 ADGRE3Q9BY15 652 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 TRIM39Q9HCM9 518 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 POT1Q9NUX5 634 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 RBM22Q9NW64 420 aaKnown RBP eCLIP15.54■□□□□ 0.086e-8■■■■■ 33.4
HERPUD1-205ENST00000562914 IP6K2Q9UHH9 426 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 PADI1Q9ULC6 663 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 VPS4AQ9UN37 437 aa15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 PCYT1BQ9Y5K3 369 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-205ENST00000562914 BLACEA4D250 179 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 ANKRD66B4E2M5 251 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 CREG1O75629 220 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 F8A1P23610 371 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 DCDC1P59894 354 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 DSC2Q02487 901 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 SLC25A11Q02978 314 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 ERV3-1Q14264 604 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 HADHQ16836 314 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 ATP1A1-AS1Q5TC04 95 aa15.53■□□□□ 0.08
HERPUD1-205ENST00000562914 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms