RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 PSMD3O43242 534 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 KIF5CO60282 957 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 PPFIA2O75334 1257 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 METTL18O95568 372 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 CELA2BP08218 269 aaPredicted RBP16.43■□□□□ 0.22
CDT1-202ENST00000562747 BPIP17213 487 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 CXCR5P32302 372 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 GABREP78334 506 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 ZNF569Q5MCW4 686 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 KCTD11Q693B1 232 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 BLOC1S5Q8TDH9 187 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 GLMNQ92990 594 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 PBKQ96KB5 322 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 TBL1YQ9BQ87 522 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 SPATA16Q9BXB7 569 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 CARS2Q9HA77 564 aaKnown RBP16.43■□□□□ 0.22
CDT1-202ENST00000562747 ARNT2Q9HBZ2 717 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 CPNE5Q9HCH3 593 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 HOMER3Q9NSC5 361 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 TRNAU1APQ9NX07 287 aaKnown RBP16.43■□□□□ 0.22
CDT1-202ENST00000562747 TRMT1Q9NXH9 659 aaKnown RBP16.43■□□□□ 0.22
CDT1-202ENST00000562747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDT1-202ENST00000562747 CNOT6Q9ULM6 557 aaKnown RBP16.43■□□□□ 0.22
CDT1-202ENST00000562747 SUFUQ9UMX1 484 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 SCN8AQ9UQD0 1980 aa16.43■□□□□ 0.22
CDT1-202ENST00000562747 A0A1W2PNU3 283 aaPredicted RBP16.42■□□□□ 0.22
CDT1-202ENST00000562747 INPP4BO15327 924 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 USP12O75317 370 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 CSO75390 466 aaKnown RBP16.42■□□□□ 0.22
CDT1-202ENST00000562747 FUCA1P04066 466 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 PCBP4P57723 403 aaKnown RBP16.42■□□□□ 0.22
CDT1-202ENST00000562747 CFHR1Q03591 330 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 SNX1Q13596 522 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 LONRF2Q1L5Z9 754 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 DOK6Q6PKX4 331 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 ZNF605Q86T29 641 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 SLC35F6Q8N357 371 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 RASGEF1CQ8N431 466 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 ZNF248Q8NDW4 579 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 DTX3LQ8TDB6 740 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 TMEM168Q9H0V1 697 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 LRRC40Q9H9A6 602 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 IL17CQ9P0M4 197 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 VPS18Q9P253 973 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 DRG1Q9Y295 367 aaKnown RBP16.42■□□□□ 0.22
CDT1-202ENST00000562747 PKP3Q9Y446 797 aa16.42■□□□□ 0.22
CDT1-202ENST00000562747 AP2A1O95782 977 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 IFNB1P01574 187 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 GP1BAP07359 652 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 FDFT1P37268 417 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 GNPDA1P46926 289 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 POLD2P49005 469 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 RPIAP49247 311 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 OLIG2Q13516 323 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 NR0B2Q15466 257 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 TAF1AQ15573 450 aaPredicted RBP16.41■□□□□ 0.22
CDT1-202ENST00000562747 ALS2CLQ60I27 953 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 DENND5AQ6IQ26 1287 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 TAF8Q7Z7C8 310 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 TRIM74Q86UV6 250 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 CCDC89Q8N998 374 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 BRSK1Q8TDC3 778 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 GPBAR1Q8TDU6 330 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 ZNF578Q96N58 590 aaPredicted RBP16.41■□□□□ 0.22
CDT1-202ENST00000562747 DEPDC7Q96QD5 511 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 APOL2Q9BQE5 337 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 GSDMCQ9BYG8 508 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 SEMA4CQ9C0C4 833 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 RMI1Q9H9A7 625 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 BPIFA1Q9NP55 256 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 ASCL3Q9NQ33 180 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 TTC7AQ9ULT0 858 aaPredicted RBP16.41■□□□□ 0.22
CDT1-202ENST00000562747 TMEM98Q9Y2Y6 226 aa16.41■□□□□ 0.22
CDT1-202ENST00000562747 EME2A4GXA9 379 aaPredicted RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 C2orf81A6NN90 581 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 ERI2A8K979 691 aaKnown RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 DXOO77932 396 aaKnown RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 ASMTLO95671 621 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 LPOP22079 712 aaPredicted RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 SPAM1P38567 509 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 PDE1BQ01064 536 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 ILF3Q12906 894 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDT1-202ENST00000562747 MSLNQ13421 630 aaPredicted RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 SPARCL1Q14515 664 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 PYCR3Q53H96 274 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 ARHGAP40Q5TG30 622 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 SLC35F3Q8IY50 421 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 ARL10Q8N8L6 244 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 PTCD2Q8WV60 388 aaKnown RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 GLYATL1Q969I3 302 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 COL26A1Q96A83 441 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 VPS35Q96QK1 796 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 OR2M4Q96R27 311 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 C19orf43Q9BQ61 176 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 POLR1BQ9H9Y6 1135 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 PAK5Q9P286 719 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 GPR34Q9UPC5 381 aa16.4■□□□□ 0.22
CDT1-202ENST00000562747 OAS3Q9Y6K5 1087 aaKnown RBP16.4■□□□□ 0.22
CDT1-202ENST00000562747 PMS2P1A4D2B8 440 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms