RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 FER1L6Q2WGJ9 1857 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 A6NNC1 897 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 HSPB2A8KAH6 182 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 KLRF2D3W0D1 207 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 SNAP23O00161 211 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 VILLO15195 856 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 FIBPO43427 364 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 NDUFB4O95168 129 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CENPBP07199 599 aaPredicted RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 ZNF853P0CG23 659 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CHRNB2P17787 502 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 SRD5A1P18405 259 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CHATP28329 748 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ICAM3P32942 547 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CLDN2P57739 230 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 SNX16P57768 344 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 MC1RQ01726 317 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CREB5Q02930 508 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 PPATQ06203 517 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 FAM27E3Q08E93 113 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ST3GAL1Q11201 340 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 LRMPQ12912 555 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 PKP1Q13835 747 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CAPSQ13938 189 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 KCTD2Q14681 263 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 LPIN1Q14693 890 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 DRAP1Q14919 205 aaPredicted RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 SHBQ15464 509 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 HSPB2Q16082 182 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ZSCAN23Q3MJ62 389 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ZNF260Q3ZCT1 412 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 Q5PR19 223 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 PARM1Q6UWI2 310 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 MOB2Q70IA6 237 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ANKRD23Q86SG2 305 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 SFTPA2Q8IWL1 248 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 RBFAQ8N0V3 343 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 KDM1BQ8NB78 822 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 TMEM163Q8TC26 289 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CD99L2Q8TCZ2 262 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 PSPC1Q8WXF1 523 aaKnown RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 JAKMIP2Q96AA8 810 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 OPTNQ96CV9 577 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 COQ8BQ96D53 544 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 FAM120BQ96EK7 910 aaKnown RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 FEM1CQ96JP0 617 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 CMTM3Q96MX0 182 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ZNF570Q96NI8 536 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 FCRL4Q96PJ5 515 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 KLHL31Q9H511 634 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 MVB12BQ9H7P6 319 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 TBC1D29Q9UFV1 150 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 SLCO3A1Q9UIG8 710 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 ZNF215Q9UL58 517 aaPredicted RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 CACNA1AO00555 2505 aa3.82□□□□□ -1.8
HERC1-215ENST00000561436 MYH14Q7Z406 1995 aaKnown RBP3.82□□□□□ -1.8
HERC1-215ENST00000561436 BCORQ6W2J9 1755 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 UBR2Q8IWV8 1755 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 CCL15-CCL14A0A0B4J2E2 113 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 AKR1B15C9JRZ8 316 aaPredicted RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 NPIPB11E5RHQ5 1161 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 CXCL11O14625 94 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 SCAMP1O15126 338 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 TGFB1I1O43294 461 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 LIASO43766 372 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 CLDN7O95471 211 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 MLYCDO95822 493 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ETFAP13804 333 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ZNF182P17025 639 aaPredicted RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 HOXD13P35453 343 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 PIK3CAP42336 1068 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 NR4A2P43354 598 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 RASSF2P50749 326 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 EFNA5P52803 228 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 F2RL1P55085 397 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 CDH8P55286 799 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ZBED6P86452 979 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 NUCB1Q02818 461 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 PPIL2Q13356 520 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 NEDD9Q14511 834 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 FGFBP1Q14512 234 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 TOMM20Q15388 145 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 CCL15Q16663 113 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 KRT24Q2M2I5 525 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 ESCO2Q56NI9 601 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 PRAMEF19Q5SWL8 479 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 C6orf141Q5SZD1 244 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 OTUD1Q5VV17 481 aaPredicted RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 LRRC8EQ6NSJ5 796 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 LCTLQ6UWM7 567 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 SLC16A12Q6ZSM3 486 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 TRILQ7L0X0 811 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 IRF2BP2Q7Z5L9 587 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 TECPR1Q7Z6L1 1165 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 DHX40Q8IX18 779 aaKnown RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 ADGRF2Q8IZF7 708 aa3.81□□□□□ -1.8
HERC1-215ENST00000561436 SRBD1Q8N5C6 995 aaKnown RBP3.81□□□□□ -1.8
HERC1-215ENST00000561436 PARP16Q8N5Y8 322 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms