RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 FCRL4Q96PJ5 515 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 OR6C1Q96RD1 312 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 OGFRQ9NZT2 677 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 KCNK6Q9Y257 313 aa18.32■□□□□ 0.52
TPM1-226ENST00000560959 TMEM191CA6NGB0 347 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 SPAG6O75602 509 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 SORBS2O94875 1100 aaKnown RBP18.31■□□□□ 0.52
TPM1-226ENST00000560959 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
TPM1-226ENST00000560959 CCDC172P0C7W6 258 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 VARSP26640 1264 aaKnown RBP18.31■□□□□ 0.52
TPM1-226ENST00000560959 GFERP55789 205 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 MAXP61244 160 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 DNASE1L3Q13609 305 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 TMCO3Q6UWJ1 677 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 TMEM26Q6ZUK4 368 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 TMEM135Q86UB9 458 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 PHYKPLQ8IUZ5 450 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 TEX26Q8N6G2 289 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 AOPEPQ8N6M6 819 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 ENOX1Q8TC92 643 aaKnown RBP18.31■□□□□ 0.52
TPM1-226ENST00000560959 KLHL6Q8WZ60 621 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 PLEKHG4BQ96PX9 1271 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 LYSMD1Q96S90 227 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 GPR87Q9BY21 358 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 CARD9Q9H257 536 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 LHX9Q9NQ69 397 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 IGSF5Q9NSI5 407 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 PRKAB1Q9Y478 270 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 PCDHGB7Q9Y5F8 929 aa18.31■□□□□ 0.52
TPM1-226ENST00000560959 A0A0U1RQS6 177 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 RGSL1A5PLK6 1076 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 H3BRJ5 948 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 GRID2O43424 1007 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 NUAK1O60285 661 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 UBXN7O94888 489 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 ACP5P13686 325 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 SH3BP2P78314 561 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 KRT31Q15323 416 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 DPYSL2Q16555 572 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 HENMT1Q5T8I9 393 aaKnown RBP18.3■□□□□ 0.52
TPM1-226ENST00000560959 CDKAL1Q5VV42 579 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 PRSS42Q7Z5A4 293 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 PPP1R3BQ86XI6 285 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 NEK11Q8NG66 645 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 CLSTN2Q9H4D0 955 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 EPHA6Q9UF33 1036 aa18.3■□□□□ 0.52
TPM1-226ENST00000560959 WIPF3A6NGB9 483 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 GPR89AB7ZAQ6 455 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 SNX2O60749 519 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 GPR89BP0CG08 455 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 AMD1P17707 334 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 CASP14P31944 242 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 ARL4AP40617 200 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 PGDP52209 483 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 EPHB1P54762 984 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 RPL26P61254 145 aaKnown RBP18.29■□□□□ 0.52
TPM1-226ENST00000560959 UGT8Q16880 541 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 BOLA3Q53S33 107 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 ALG1LQ6GMV1 187 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 POLNQ7Z5Q5 900 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 BPHLQ86WA6 291 aaPredicted RBP18.29■□□□□ 0.52
TPM1-226ENST00000560959 ATPAF2Q8N5M1 289 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 WDR24Q96S15 920 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 SLC25A23Q9BV35 468 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 TRIM55Q9BYV6 548 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 RAB33BQ9H082 229 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 BRD8Q9H0E9 1235 aa18.29■□□□□ 0.52
TPM1-226ENST00000560959 RPL26L1Q9UNX3 145 aaKnown RBP18.29■□□□□ 0.52
TPM1-226ENST00000560959 LRCH4O75427 683 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 DNAJB5O75953 348 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 CLDN7O95471 211 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 VIPP01282 170 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 AMPD1P23109 780 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 SERPINB6P35237 376 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 PCK1P35558 622 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 MAMDC2Q7Z304 686 aaPredicted RBP18.28■□□□□ 0.52
TPM1-226ENST00000560959 HPS6Q86YV9 775 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 RBM12BQ8IXT5 1001 aaKnown RBP18.28■□□□□ 0.52
TPM1-226ENST00000560959 CT55Q8WUE5 264 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 ZDHHC12Q96GR4 267 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 TGM7Q96PF1 710 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 POLR1EQ9GZS1 481 aaKnown RBP18.28■□□□□ 0.52
TPM1-226ENST00000560959 FAM83DQ9H4H8 585 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 PDE7BQ9NP56 450 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 ETNK2Q9NVF9 386 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 SEMA5BQ9P283 1151 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 LNPEPQ9UIQ6 1025 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 ADGRG1Q9Y653 693 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 SLC30A1Q9Y6M5 507 aa18.28■□□□□ 0.52
TPM1-226ENST00000560959 RNF224P0DH78 156 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 FERP16591 822 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 TYRP1P17643 537 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 NELFEP18615 380 aaKnown RBP18.27■□□□□ 0.52
TPM1-226ENST00000560959 PTPN4P29074 926 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 SPINT3P49223 89 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 SEPHS1P49903 392 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 ESPL1Q14674 2120 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 NADK2Q4G0N4 442 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 SYVN1Q86TM6 617 aa18.27■□□□□ 0.52
TPM1-226ENST00000560959 TICAM1Q8IUC6 712 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms