RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ZKSCAN5Q9Y2L8 839 aa11.97□□□□□ -0.49
USP8-212ENST00000560730 PKP3Q9Y446 797 aa11.97□□□□□ -0.49
USP8-212ENST00000560730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP8-212ENST00000560730 MAP1BP46821 2468 aaKnown RBP11.97□□□□□ -0.49
USP8-212ENST00000560730 PIKFYVEQ9Y2I7 2098 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 EME2A4GXA9 379 aaPredicted RBP11.96□□□□□ -0.49
USP8-212ENST00000560730 FAM221BA6H8Z2 402 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 C2orf81A6NN90 581 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 CCL22O00626 93 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 PSMD3O43242 534 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 LDB2O43679 373 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 FDFT1P37268 417 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 DUSP3P51452 185 aaPredicted RBP11.96□□□□□ -0.49
USP8-212ENST00000560730 ZNF140P52738 457 aaPredicted RBP11.96□□□□□ -0.49
USP8-212ENST00000560730 INSM1Q01101 510 aaPredicted RBP11.96□□□□□ -0.49
USP8-212ENST00000560730 CCDC173Q0VFZ6 552 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 ILF3Q12906 894 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP8-212ENST00000560730 ILKQ13418 452 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 PDPK2PQ6A1A2 396 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 OGFOD3Q6PK18 319 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 SLC30A9Q6PML9 568 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 GALNT13Q8IUC8 556 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 CCDC89Q8N998 374 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 GPR156Q8NFN8 814 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 OR52K1Q8NGK4 314 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 PATE1Q8WXA2 126 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 GSDMCQ9BYG8 508 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 DPEP2Q9H4A9 486 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 TRIM39Q9HCM9 518 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP8-212ENST00000560730 FKBPLQ9UIM3 349 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 RABGEF1Q9UJ41 708 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 TTC7AQ9ULT0 858 aaPredicted RBP11.96□□□□□ -0.49
USP8-212ENST00000560730 SNX12Q9UMY4 172 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 MSRB2Q9Y3D2 182 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 NEUROG3Q9Y4Z2 214 aa11.96□□□□□ -0.49
USP8-212ENST00000560730 GLYATL1P3A0A0U1RQE8 302 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 B4DGG1 531 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 NUAK1O60285 661 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 OPA1O60313 960 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 CRTAMO95727 393 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 EML2O95834 649 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 ACTN2P35609 894 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 ACTR1BP42025 376 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 RPIAP49247 311 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 ACTR1AP61163 376 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 TMPRSS15P98073 1019 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 XIAPP98170 497 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 SEMA5AQ13591 1074 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 POU6F1Q14863 301 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 TRIP13Q15645 432 aaPredicted RBP11.95□□□□□ -0.5
USP8-212ENST00000560730 CERCAMQ5T4B2 595 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 HES3Q5TGS1 186 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 CCNI2Q6ZMN8 369 aaPredicted RBP11.95□□□□□ -0.5
USP8-212ENST00000560730 CHST15Q7LFX5 561 aaPredicted RBP11.95□□□□□ -0.5
USP8-212ENST00000560730 GSTA5Q7RTV2 222 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 C17orf53Q8N3J3 647 aaPredicted RBP11.95□□□□□ -0.5
USP8-212ENST00000560730 ARL10Q8N8L6 244 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 GATA6Q92908 595 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 GLMNQ92990 594 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 VPS35Q96QK1 796 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
USP8-212ENST00000560730 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 NCKIPSDQ9NZQ3 722 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 PAK5Q9P286 719 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 SLC23A2Q9UGH3 650 aa11.95□□□□□ -0.5
USP8-212ENST00000560730 FEZ2Q9UHY8 353 aaPredicted RBP11.95□□□□□ -0.5
USP8-212ENST00000560730 CCDC78A2IDD5 438 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ERI2A8K979 691 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 PGRMC1O00264 195 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 CHUKO15111 745 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 FANCGO15287 622 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 GRID2O43424 1007 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 SUN1O94901 812 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 GP1BAP07359 652 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ACP5P13686 325 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 MAZP56270 477 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 GNG11P61952 73 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 E2F1Q01094 437 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 PEX6Q13608 980 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 SEPT6Q14141 434 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CCDC38Q502W7 563 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ZDHHC20Q5W0Z9 365 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 CRTC3Q6UUV7 619 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 LINC00523Q86TU6 105 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 PHYKPLQ8IUZ5 450 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ZNF547Q8IVP9 402 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 NAGSQ8N159 534 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 GDAP1Q8TB36 358 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 DTX3LQ8TDB6 740 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 ZDHHC1Q8WTX9 485 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 NAT14Q8WUY8 206 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 MAGOHBQ96A72 148 aaKnown RBP11.94□□□□□ -0.5
USP8-212ENST00000560730 CCDC74AQ96AQ1 378 aa11.94□□□□□ -0.5
USP8-212ENST00000560730 LRRC45Q96CN5 670 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms