RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 LDB1Q86U70 411 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 PIM3Q86V86 326 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 PDSS2Q86YH6 399 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 PQLC1Q8N2U9 271 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 CARNMT1Q8N4J0 409 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 ADCY4Q8NFM4 1077 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 OR56A4Q8NGH8 313 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 GATA6Q92908 595 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 ISG20Q96AZ6 181 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 MIEF2Q96C03 454 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 ALG14Q96F25 216 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MYO19Q96H55 970 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 BIRC8Q96P09 236 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 DEFB118Q96PH6 123 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 LYSMD1Q96S90 227 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 P2RY12Q9H244 342 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MUC13Q9H3R2 512 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MRPL17Q9NRX2 175 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 GKN1Q9NS71 199 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 CACNA2D2Q9NY47 1150 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 KIAA1522Q9P206 1035 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 CROTQ9UKG9 612 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MED16Q9Y2X0 877 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 DHRS7Q9Y394 339 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 ZNF711Q9Y462 761 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MTF2Q9Y483 593 aaPredicted RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 SLC30A1Q9Y6M5 507 aa9.64□□□□□ -0.87
RTF1-206ENST00000560447 MTCL1Q9Y4B5 1905 aaKnown RBP9.64□□□□□ -0.87
RTF1-206ENST00000560447 C2orf78A6NCI8 922 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 VGLL3A8MV65 326 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 TMEM233B4DJY2 109 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 SUPT3HB4E1H0 165 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 H3BNX3 289 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 UBXN8O00124 270 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 CCL22O00626 93 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 UBFD1O14562 309 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 ACOT8O14734 319 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PRMT5O14744 637 aaPredicted RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 GIPC1O14908 333 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 KIF1CO43896 1103 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 LILRB3O75022 631 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 CLASP2O75122 1294 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 SUPT3HO75486 399 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PGLSO95336 258 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 STAMBPO95630 424 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 ESRRBO95718 433 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 IGSF6O95976 241 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 NPPAP01160 153 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 C8BP07358 591 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PRR35P0CG20 571 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 UROSP10746 265 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 HSPA8P11142 646 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 CCL5P13501 91 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 ENO3P13929 434 aaPredicted RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 RAG1P15918 1043 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 ZNF7P17097 686 aaPredicted RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 GPX3P22352 226 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.87
RTF1-206ENST00000560447 FMO4P31512 558 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 KCNC1P48547 511 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 RGS4P49798 205 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 SGSHP51688 502 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 THOP1P52888 689 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PGGT1BP53609 377 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 SH3BP2P78314 561 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PEX6Q13608 980 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 CDH18Q13634 790 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 CEACAM7Q14002 265 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 TRIM25Q14258 630 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 PCBP2Q15366 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
RTF1-206ENST00000560447 AGKQ53H12 422 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 CDKL4Q5MAI5 379 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PPM1LQ5SGD2 360 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 ZDHHC20Q5W0Z9 365 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 REP15Q6BDI9 236 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 TMEM150AQ86TG1 271 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 MIER2Q8N344 545 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 CD200R1Q8TD46 325 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 TWIST2Q8WVJ9 160 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PYDC1Q8WXC3 89 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 FUBP1Q96AE4 644 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 TUBGCP5Q96RT8 1024 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 ZNF382Q96SR6 550 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 GPR21Q99679 349 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 SHCBP1LQ9BZQ2 653 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 Q9H521 79 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 MID1IP1Q9NPA3 183 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 SPAG4Q9NPE6 437 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 LATS2Q9NRM7 1088 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 RIC8BQ9NVN3 520 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 GID8Q9NWU2 228 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 VPS51Q9UID3 782 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 FKBPLQ9UIM3 349 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 PCDHGA7Q9Y5G6 932 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 DNAJC15Q9Y5T4 150 aa9.63□□□□□ -0.87
RTF1-206ENST00000560447 MRPL42Q9Y6G3 142 aaKnown RBP9.63□□□□□ -0.87
RTF1-206ENST00000560447 TRBV5-4A0A0C4DH59 114 aa9.62□□□□□ -0.87
RTF1-206ENST00000560447 A0A0J9YYE9 177 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms