RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 VCPIP1Q96JH7 1222 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 MRPL45Q9BRJ2 306 aaKnown RBP6.13□□□□□ -1.43
CRNDE-207ENST00000559598 MED10Q9BTT4 135 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 TRIM4Q9C037 500 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 MANSC1Q9H8J5 431 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 MRPL44Q9H9J2 332 aaKnown RBP6.13□□□□□ -1.43
CRNDE-207ENST00000559598 USP29Q9HBJ7 922 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 PNPLA8Q9NP80 782 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 ASCL3Q9NQ33 180 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 OLFML3Q9NRN5 406 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 STARD5Q9NSY2 213 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.13□□□□□ -1.43
CRNDE-207ENST00000559598 SUN2Q9UH99 717 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 FZD4Q9ULV1 537 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 PLA2G4CQ9UP65 541 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 SCML2Q9UQR0 700 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 JRKLQ9Y4A0 524 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 DOCK9Q9BZ29 2069 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 ICE1Q9Y2F5 2266 aa6.13□□□□□ -1.43
CRNDE-207ENST00000559598 A0A1W2PR77 199 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 A6NNZ2 444 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 TLR4O00206 839 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 CLDN5O00501 218 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 TEX33O43247 280 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 RNASEH1O60930 286 aaKnown RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 USP12O75317 370 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ZNF202O95125 648 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 TBX18O95935 607 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 BMP15O95972 392 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ATP5BP06576 529 aaKnown RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 RAP2AP10114 183 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ALPPL2P10696 532 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 RALAP11233 206 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 FPR1P21462 350 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 CCND1P24385 295 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ATICP31939 592 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ACVRL1P37023 503 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 RP1P56715 2156 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 NHLH2Q02577 135 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 TUBB2AQ13885 445 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ARL13BQ3SXY8 428 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 TUBB8Q3ZCM7 444 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 DOPEY1Q5JWR5 2465 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 C10orf120Q5SQS8 335 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ATXN7L2Q5T6C5 722 aaPredicted RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 STXBP4Q6ZWJ1 553 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 SFR1Q86XK3 245 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 FAM217AQ8IXS0 508 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 COL27A1Q8IZC6 1860 aaPredicted RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 OR5B17Q8NGF7 314 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 OR2T34Q8NGX1 318 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 ZNF483Q8TF39 744 aaPredicted RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 SLC25A43Q8WUT9 341 aaPredicted RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 DCLRE1CQ96SD1 692 aaKnown RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 KCNK16Q96T55 309 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 SEMA3CQ99985 751 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 MRI1Q9BV20 369 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 TUBB2BQ9BVA1 445 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 SCAND2PQ9GZW5 306 aaPredicted RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 RSPH9Q9H1X1 276 aaPredicted RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 PABPC3Q9H361 631 aaKnown RBP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 DPEP3Q9H4B8 488 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 CSNK1G1Q9HCP0 422 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 MED4Q9NPJ6 270 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 BLOC1S4Q9NUP1 217 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
CRNDE-207ENST00000559598 DONSONQ9NYP3 566 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 CLIC5Q9NZA1 410 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 PCDHB1Q9Y5F3 818 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 HS3ST3A1Q9Y663 406 aa6.12□□□□□ -1.43
CRNDE-207ENST00000559598 UBE4BO95155 1302 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 GOLGA8IPA6NC78 632 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 ERICH4A6NGS2 130 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 GOLGA8JA6NMD2 632 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 C10orf142B7Z368 130 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 GOLGA6L19H0YKK7 550 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 PPFIA2O75334 1257 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 CSO75390 466 aaKnown RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 GCNT3O95395 438 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 WNT1P04628 370 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 AMY1AP04745 511 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 DLDP09622 509 aaKnown RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 FAM200BP0CF97 657 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 CKMT1AP12532 417 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 RARGP13631 454 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 P4HA1P13674 534 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 PDCP20941 246 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 CORO1AP31146 461 aaKnown RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 LONP1P36776 959 aaKnown RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 SSR1P43307 286 aaKnown RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 HARS2P49590 506 aaKnown RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 DUSP3P51452 185 aaPredicted RBP6.11□□□□□ -1.43
CRNDE-207ENST00000559598 GALCP54803 685 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 MTM1Q13496 603 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 TRPC3Q13507 836 aa6.11□□□□□ -1.43
CRNDE-207ENST00000559598 ODF1Q14990 250 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms