RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TRIM42Q8IWZ5 723 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 RHOT1Q8IXI2 618 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PLPP6Q8IY26 295 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 SRRM1Q8IYB3 904 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 CCDC185Q8N715 623 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ANKRD42Q8N9B4 389 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 NETO2Q8NC67 525 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PPFIBP2Q8ND30 876 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ZNF248Q8NDW4 579 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 FAM13CQ8NE31 585 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 JOSD2Q8TAC2 188 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 IFI44Q8TCB0 444 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 C10orf82Q8WW14 230 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ASB12Q8WXK4 309 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 TTC9Q92623 222 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CENPIQ92674 756 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 ISG20Q96AZ6 181 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 ERP27Q96DN0 273 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ATXN7L3BQ96GX2 97 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ZNF578Q96N58 590 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 NUDCD1Q96RS6 583 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PCDHB18PQ96TA0 734 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 SPON2Q9BUD6 331 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 TBC1D10AQ9BXI6 508 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 TM6SF2Q9BZW4 377 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CLPBQ9H078 707 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 MYLK2Q9H1R3 596 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 VPS11Q9H270 941 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 SYNCQ9H7C4 482 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 POLR1BQ9H9Y6 1135 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 LRRC4CQ9HCJ2 640 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 MBNL1Q9NR56 388 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 PAPOLBQ9NRJ5 636 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 METTL5Q9NRN9 209 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 IGSF5Q9NSI5 407 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ETAA1Q9NY74 926 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PDP2Q9P2J9 529 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 PSMC3IPQ9P2W1 217 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 HECAQ9UBI9 543 aaPredicted RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 SCOCQ9UIL1 159 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 STAP1Q9ULZ2 295 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 SATB2Q9UPW6 733 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CHKBQ9Y259 395 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 DRG1Q9Y295 367 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 EFR3BQ9Y2G0 817 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 STK38LQ9Y2H1 464 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 MTO1Q9Y2Z2 717 aaKnown RBP5.88□□□□□ -1.47
USP3-212ENST00000559276 ENTPD2Q9Y5L3 495 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 CSNK1G3Q9Y6M4 447 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 RP1P56715 2156 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 BOD1L1Q8NFC6 3051 aa5.88□□□□□ -1.47
USP3-212ENST00000559276 ANKRD36A6QL64 1941 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TCRBV5S1A1TA0A578 114 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 C2CD4BA6NLJ0 364 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 C16orf96A6NNT2 1141 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ENO4A6NNW6 628 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TMEM110-MUSTN1A8MSY1 372 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 CDRT15L2A8MXV6 281 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ERVH48-1M5A8F1 160 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 DNALI1O14645 258 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 TPP1O14773 563 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 KLF11O14901 512 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 INSIG1O15503 277 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 AQP9O43315 295 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TSPAN6O43657 245 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 LRIG2O94898 1065 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 TJP3O95049 919 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 LSM8O95777 96 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 GSRP00390 522 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 UNGP13051 313 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 RHOQP17081 205 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 JUNDP17535 347 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 KRT15P19012 456 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 MMP8P22894 467 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 MAGEA4P43358 317 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 RABIFP47224 123 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 PTDSS1P48651 473 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 HDAC4P56524 1084 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 WDR4P57081 412 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 PCBP4P57723 403 aaKnown RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 SNX16P57768 344 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ERVPABLB-1P60509 514 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 CFHR1Q03591 330 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 MGAT5Q09328 741 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 C1orf61Q13536 156 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 PDE1CQ14123 709 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 MPP2Q14168 576 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 DBN1Q16643 649 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 KYNUQ16719 465 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 MUM1Q2TAK8 710 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ZNF805Q5CZA5 627 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 EFHC2Q5JST6 749 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 ATXN7L2Q5T6C5 722 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 ACBD5Q5T8D3 534 aaPredicted RBP5.87□□□□□ -1.47
USP3-212ENST00000559276 HHATQ5VTY9 493 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 IZUMO3Q5VZ72 239 aa5.87□□□□□ -1.47
USP3-212ENST00000559276 CRTC1Q6UUV9 634 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms