RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 KANSL1Q7Z3B3 1105 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 OR13J1Q8NGT2 312 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 LMX1AQ8TE12 382 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 SETD7Q8WTS6 366 aaKnown RBP25.31■■□□□ 1.64
SMAD6-202ENST00000557916 PTCD2Q8WV60 388 aaKnown RBP25.31■■□□□ 1.64
SMAD6-202ENST00000557916 TBATAQ96M53 351 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 ERP44Q9BS26 406 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 LRRC61Q9BV99 259 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 TRIM39Q9HCM9 518 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 VPS18Q9P253 973 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 SLC2A6Q9UGQ3 507 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 SLC30A1Q9Y6M5 507 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 ASCC3Q8N3C0 2202 aaKnown RBP25.31■■□□□ 1.64
SMAD6-202ENST00000557916 AQP9O43315 295 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 SH3BP5O60239 455 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 IVLP07476 585 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 ITGALP20701 1170 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 CA5AP35218 305 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 ARSDP51689 593 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 NFATC2Q13469 925 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 C1orf61Q13536 156 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 MORF4L2Q15014 288 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 INAVAQ3KP66 663 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 NAXDQ8IW45 347 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 PEX13Q92968 403 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 SCARF2Q96GP6 870 aaPredicted RBP25.3■■□□□ 1.64
SMAD6-202ENST00000557916 OR2AG1Q9H205 316 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 SMOXQ9NWM0 555 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 SNX24Q9Y343 169 aa25.3■■□□□ 1.64
SMAD6-202ENST00000557916 NEMP2A6NFY4 417 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 SDR42E2A6NKP2 422 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 SMAPO00193 183 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 TM4SF5O14894 197 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 SEC31AO94979 1220 aaKnown RBP25.29■■□□□ 1.64
SMAD6-202ENST00000557916 GRK6P43250 576 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 MAGEA3P43357 314 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 GNPDA1P46926 289 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ACVR1Q04771 509 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 LDLRAP1Q5SW96 308 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 HIBCHQ6NVY1 386 aaPredicted RBP25.29■■□□□ 1.64
SMAD6-202ENST00000557916 SNX20Q7Z614 316 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 MPP5Q8N3R9 675 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 FSTL5Q8N475 847 aaPredicted RBP25.29■■□□□ 1.64
SMAD6-202ENST00000557916 HDAC10Q969S8 669 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 RTKNQ9BST9 563 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 KIFC1Q9BW19 673 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 FAM96AQ9H5X1 160 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ATXN10Q9UBB4 475 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CRLS1Q9UJA2 301 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ANAPC5Q9UJX4 755 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 BTBD3Q9Y2F9 522 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CSNK1G3Q9Y6M4 447 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CTAGE15A4D2H0 777 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 MTX2O75431 263 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CTAGE8P0CG41 777 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 RPL21P46778 160 aaKnown RBP25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ITGA8P53708 1063 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ELOCQ15369 112 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 TCEA2Q15560 299 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ZRANB3Q5FWF4 1079 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 GPRC6AQ5T6X5 926 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CASC4Q6P4E1 433 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ADGRG6Q86SQ4 1221 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 PIP4P1Q86T03 277 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CTAGE6Q86UF2 777 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CTAGE4Q8IX94 777 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 DDHD1Q8NEL9 900 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 RHBDD1Q8TEB9 315 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ULK4Q96C45 1275 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 CLPBQ9H078 707 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 TMEM168Q9H0V1 697 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 MRM3Q9HC36 420 aaKnown RBP25.29■■□□□ 1.64
SMAD6-202ENST00000557916 SAMD15Q9P1V8 674 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 ZNHIT2Q9UHR6 403 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 SOX13Q9UN79 622 aa25.29■■□□□ 1.64
SMAD6-202ENST00000557916 UTP11Q9Y3A2 253 aaKnown RBP25.29■■□□□ 1.64
SMAD6-202ENST00000557916 TDRD6O60522 2096 aaKnown RBP25.28■■□□□ 1.64
SMAD6-202ENST00000557916 BPTFQ12830 3046 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 CCDC162PA2VCL2 907 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 AGAP14A8MT82 685 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 NDC80O14777 642 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 FFAR2O15552 330 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 VEGFDO43915 354 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 NUAK1O60285 661 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 DNAJC6O75061 913 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 ZNF8P17098 575 aaPredicted RBP25.28■■□□□ 1.64
SMAD6-202ENST00000557916 GPR33Q49SQ1 333 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 KHDC1Q4VXA5 237 aaKnown RBP25.28■■□□□ 1.64
SMAD6-202ENST00000557916 ARMC3Q5W041 872 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 C8orf74Q6P047 294 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 MICALCLQ6ZW33 695 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 GALNT13Q8IUC8 556 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 EID2Q8N6I1 236 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 BBOF1Q8ND07 529 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 DPH5Q9H2P9 285 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 RMI1Q9H9A7 625 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 GPSM3Q9Y4H4 160 aa25.28■■□□□ 1.64
SMAD6-202ENST00000557916 ZNF106Q9H2Y7 1883 aaKnown RBP25.27■■□□□ 1.64
SMAD6-202ENST00000557916 LRP4O75096 1905 aa25.27■■□□□ 1.64
SMAD6-202ENST00000557916 MAGEB16A2A368 324 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms