RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ZNF248Q8NDW4 579 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 DBF4BQ8NFT6 615 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 THAP6Q8TBB0 222 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 SLC38A5Q8WUX1 472 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 TM9SF4Q92544 642 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 KLHL29Q96CT2 875 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 APOPT1Q96IL0 206 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 FSD1Q9BTV5 496 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 TFB2MQ9H5Q4 396 aaKnown RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 ACSS1Q9NUB1 689 aaPredicted RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 MAP3K20Q9NYL2 800 aaKnown RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 ZNF624Q9P2J8 865 aaPredicted RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 POLG2Q9UHN1 485 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 ACSL5Q9ULC5 683 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 KLHL20Q9Y2M5 609 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 KCNK7Q9Y2U2 307 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 AAR2Q9Y312 384 aaKnown RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 CDC42BPBQ9Y5S2 1711 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 KIF14Q15058 1648 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 ZCCHC11Q5TAX3 1644 aaKnown RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 PREX2Q70Z35 1606 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 MAGI3Q5TCQ9 1506 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 KDM5BQ9UGL1 1544 aa3.95□□□□□ -1.78
VRK1-207ENST00000557352 PRG4Q92954 1404 aaPredicted RBP3.95□□□□□ -1.78
VRK1-207ENST00000557352 TCOF1Q13428 1488 aaKnown RBP3.94□□□□□ -1.78
VRK1-207ENST00000557352 ZNF500O60304 480 aaPredicted RBP3.94□□□□□ -1.78
VRK1-207ENST00000557352 KRT5P13647 590 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 RUNX1T1Q06455 604 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 DECR1Q16698 335 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 ALG11Q2TAA5 492 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 WDR38Q5JTN6 314 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 ZC2HC1BQ5TFG8 222 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 C18orf63Q68DL7 685 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 ZNF704Q6ZNC4 412 aaPredicted RBP3.94□□□□□ -1.78
VRK1-207ENST00000557352 ZNF497Q6ZNH5 498 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 GPR180Q86V85 440 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 STPG4Q8N801 248 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 TAAR8Q969N4 342 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 KIF1BPQ96EK5 621 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 STAMBPL1Q96FJ0 436 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 PPP1R13BQ96KQ4 1090 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 EIF2AK1Q9BQI3 630 aaKnown RBP3.94□□□□□ -1.78
VRK1-207ENST00000557352 KCND2Q9NZV8 630 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 PTPN23Q9H3S7 1636 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 ARAP3Q8WWN8 1544 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 MIA2Q96PC5 1412 aa3.94□□□□□ -1.78
VRK1-207ENST00000557352 ERCC6L2Q5T890 1561 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 DNMT1P26358 1616 aaKnown RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 IGKV3D-20A0A0C4DH25 116 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 SNAP23O00161 211 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 TSPAN4O14817 238 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 EIF3DO15371 548 aaKnown RBP eCLIP3.93□□□□□ -1.78
VRK1-207ENST00000557352 CTSVO60911 334 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 HNRNPA1P09651 372 aaKnown RBP eCLIP3.93□□□□□ -1.78
VRK1-207ENST00000557352 ARCN1P48444 511 aaKnown RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 DRG2P55039 364 aaKnown RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 GNB1P62873 340 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 PLIN5Q00G26 463 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 TLE2Q04725 743 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 GALNT2Q10471 571 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 GRIK2Q13002 908 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 DRAP1Q14919 205 aaPredicted RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 GPR68Q15743 365 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 TAF12Q16514 161 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 DCST1Q5T197 706 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 CACNA2D4Q7Z3S7 1137 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 MAP7D3Q8IWC1 876 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 SRBD1Q8N5C6 995 aaKnown RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 TRIM58Q8NG06 486 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 APBB2Q92870 758 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 TMEM47Q9BQJ4 181 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 BRF2Q9HAW0 419 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 SLC6A13Q9NSD5 602 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 FBXL2Q9UKC9 423 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 CDK13Q14004 1512 aaKnown RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 TROQ12816 1431 aaPredicted RBP3.93□□□□□ -1.78
VRK1-207ENST00000557352 MYOM3Q5VTT5 1437 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 UACAQ9BZF9 1416 aa3.93□□□□□ -1.78
VRK1-207ENST00000557352 KIAA1210Q9ULL0 1709 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 COL2A1P02458 1487 aaPredicted RBP3.92□□□□□ -1.78
VRK1-207ENST00000557352 NCOA2Q15596 1464 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 PLB1Q6P1J6 1458 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 SMCHD1A6NHR9 2005 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 TTC36A6NLP5 189 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 NCAM2O15394 837 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 EXTL3O43909 919 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 CNTFP26441 200 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 CHRNB4P30926 498 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 APOBEC1P41238 236 aaKnown RBP3.92□□□□□ -1.78
VRK1-207ENST00000557352 CLDN20P56880 219 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 PRICKLE4Q2TBC4 344 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 C15orf39Q6ZRI6 1047 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 DPPA4Q7L190 304 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 APLFQ8IW19 511 aaPredicted RBP3.92□□□□□ -1.78
VRK1-207ENST00000557352 CCDC13Q8IYE1 715 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 MAPK1IP1LQ8NDC0 245 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 FCAMRQ8WWV6 532 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 GCC1Q96CN9 775 aa3.92□□□□□ -1.78
VRK1-207ENST00000557352 NEUROD6Q96NK8 337 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms