RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ACP5P13686 325 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 F3P13726 295 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 FECHP22830 423 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 KIR3DL1P43629 444 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 PPP1CAP62136 330 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 POLR2LP62875 67 aaKnown RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 UBE2IP63279 158 aaKnown RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 ATP11AP98196 1134 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 BCL2L1Q07817 233 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 CDC16Q13042 620 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 FAM102AQ5T9C2 384 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 CYB5D1Q6P9G0 228 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 TMEM26Q6ZUK4 368 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 ZNF765Q7L2R6 523 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 TMEM126BQ8IUX1 230 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 CEP97Q8IW35 865 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 C14orf79Q96F83 325 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 NSMCE3Q96MG7 304 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 FCRL4Q96PJ5 515 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 PLEKHG4BQ96PX9 1271 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 SEMA3GQ9NS98 782 aa12.32□□□□□ -0.44
PSEN1-220ENST00000557037 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
PSEN1-220ENST00000557037 IGHV5-51A0A0C4DH38 117 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 KIR2DS5A0A0G2JLQ3 304 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 A0A0G2JNG1 304 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 A0A0U1RQS6 177 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 A0A1W2PQJ5 194 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 GOLGA8SH3BPF8 625 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 J3KR12 359 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 KIR2DS3K7RE56 304 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SOD1P00441 154 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 KLK3P07288 261 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-220ENST00000557037 RAB40ALP0C0E4 278 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SLC2A4P14672 509 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 KLK2P20151 261 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 TEAD1P28347 426 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 VIPR1P32241 457 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 ADRA1BP35368 520 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SNX16P57768 344 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 NRG1Q02297 640 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-220ENST00000557037 Q0VFX4 171 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 CETN1Q12798 172 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 PAK1Q13153 545 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 KIR2DS5Q14953 304 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 PTPRRQ15256 657 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 DCAF10Q5QP82 559 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 PRAMEF17Q5VTA0 474 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 Q71RC1 249 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-220ENST00000557037 TTC30BQ8N4P2 665 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 LZTR1Q8N653 840 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
PSEN1-220ENST00000557037 CNDP1Q96KN2 507 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 TSG101Q99816 390 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SLX1AQ9BQ83 275 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SCAND2PQ9GZW5 306 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-220ENST00000557037 RETREG1Q9H6L5 497 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-220ENST00000557037 SH3BGRL2Q9UJC5 107 aa12.31□□□□□ -0.44
PSEN1-220ENST00000557037 BECN2A8MW95 431 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 PMM2O15305 246 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 IPO13O94829 963 aaKnown RBP12.3□□□□□ -0.44
PSEN1-220ENST00000557037 ATP1A1P05023 1023 aaKnown RBP12.3□□□□□ -0.44
PSEN1-220ENST00000557037 PFKFB1P16118 471 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 LHCGRP22888 699 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 TSFMP43897 325 aaKnown RBP12.3□□□□□ -0.44
PSEN1-220ENST00000557037 CAPZBP47756 277 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
PSEN1-220ENST00000557037 FKBP3Q00688 224 aaKnown RBP12.3□□□□□ -0.44
PSEN1-220ENST00000557037 LTBQ06643 244 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 CUL4AQ13619 759 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 GPR19Q15760 415 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 CDO1Q16878 200 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 C2CD6Q53TS8 623 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 PLEKHS1Q5SXH7 462 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 GJB7Q6PEY0 223 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 ADAMTSL4Q6UY14 1074 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 RPTNQ6XPR3 784 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 SPOCD1Q6ZMY3 1216 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 BNIPLQ7Z465 357 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 MRGPREQ86SM8 312 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 TRIM48Q8IWZ4 208 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 DNAJB14Q8TBM8 379 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 SCAMP4Q969E2 229 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 ZDHHC12Q96GR4 267 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 SLC41A2Q96JW4 573 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 ZNF514Q96K75 400 aaPredicted RBP12.3□□□□□ -0.44
PSEN1-220ENST00000557037 AGAP2Q99490 1192 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 NLNQ9BYT8 704 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 UCK1Q9HA47 277 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 OLAHQ9NV23 265 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 PCDHGC3Q9UN70 934 aa12.3□□□□□ -0.44
PSEN1-220ENST00000557037 TTC24A2A3L6 582 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-220ENST00000557037 TRIM49BA6NDI0 452 aa12.29□□□□□ -0.44
PSEN1-220ENST00000557037 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms