RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 NAT16Q8N8M0 369 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TERB1Q8NA31 727 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 STYXQ8WUJ0 223 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 GRAMD1AQ96CP6 724 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 MFSD3Q96ES6 412 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 MED8Q96G25 268 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 ACOX2Q99424 681 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TDRD1Q9BXT4 1180 aaKnown RBP14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TRIM4Q9C037 500 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 VPS11Q9H270 941 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 CPNE5Q9HCH3 593 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 SPHK2Q9NRA0 654 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 PIH1D1Q9NWS0 290 aaKnown RBP14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 WSB2Q9NYS7 404 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 DEC1Q9P2X7 70 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 GGA2Q9UJY4 613 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 CORO1CQ9ULV4 474 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 PCDHGA1Q9Y5H4 931 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 AHCTF1Q8WYP5 2266 aa14.22□□□□□ -0.13
TRAPPC6B-206ENST00000556765 A0A1W2PPM1 405 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 MROH6A6NGR9 719 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 PCDHGA12O60330 932 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 GLRA3O75311 464 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TULP3O75386 442 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 ASMTLO95671 621 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 IGSF6O95976 241 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 MPOP05164 745 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TPH1P17752 444 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 PSMA3P25788 255 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 NMBRP28336 390 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 MZF1P28698 734 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 CRHR1P34998 444 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 CSNK1EP49674 416 aaKnown RBP14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 SCNN1BP51168 640 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 NEK3P51956 506 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 OLIG2Q13516 323 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 SEPT6Q14141 434 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 KIF19Q2TAC6 998 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 INAVAQ3KP66 663 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 NCEH1Q6PIU2 408 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 KYAT3Q6YP21 454 aaKnown RBP14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 SH2D5Q6ZV89 423 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 STRA8Q7Z7C7 330 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 PLPP6Q8IY26 295 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 C4orf33Q8N1A6 199 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 ANKRD42Q8N9B4 389 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 RAB3IL1Q8TBN0 382 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 WFIKKN2Q8TEU8 576 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TTC9Q92623 222 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TUBGCP5Q96RT8 1024 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 TRIB3Q96RU7 358 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 GABRG3Q99928 467 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 PLCD4Q9BRC7 762 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 RHOJQ9H4E5 214 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 LHX3Q9UBR4 397 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 DCDC2Q9UHG0 476 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 EIF2B4Q9UI10 523 aaKnown RBP14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 SLC25A13Q9UJS0 675 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 MID2Q9UJV3 735 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 HS3ST2Q9Y278 367 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 STARD13Q9Y3M8 1113 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 SNX11Q9Y5W9 270 aa14.21□□□□□ -0.13
TRAPPC6B-206ENST00000556765 RELNP78509 3460 aa14.21□□□□□ -0.14
TRAPPC6B-206ENST00000556765 C2orf81A6NN90 581 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MUSKO15146 869 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PFDN6O15212 129 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 RFPL1O75677 317 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 RFPL3O75679 317 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GSRP00390 522 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ERVK-10P10266 1014 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MAGEA12P43365 314 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GRIA4P48058 902 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ARCN1P48444 511 aaKnown RBP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CCT8P50990 548 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 UCNP55089 124 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SNRPD1P62314 119 aaKnown RBP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 RAD51Q06609 339 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TAF1AQ15573 450 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PDK4Q16654 411 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TBC1D25Q3MII6 688 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 HSP90AA5PQ58FG0 334 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 FSCBQ5H9T9 825 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 HES3Q5TGS1 186 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 BROXQ5VW32 411 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TPGS1Q6ZTW0 290 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MICALCLQ6ZW33 695 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CPLX4Q7Z7G2 160 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SRLQ86TD4 932 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TAX1BP1Q86VP1 789 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PCDH20Q8N6Y1 951 aaKnown RBP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 C1orf216Q8TAB5 229 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PTPRN2Q92932 1015 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ZNF317Q96PQ6 595 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GPR22Q99680 433 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 BBS2Q9BXC9 721 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NOD2Q9HC29 1040 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GRID1Q9ULK0 1009 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms