RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C9P02748 559 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 UNGP13051 313 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 VARSP26640 1264 aaKnown RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 SOX5P35711 763 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 LEPRP48357 1165 aaKnown RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 EPHB1P54762 984 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 MAXP61244 160 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 RPS15P62841 145 aaKnown RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 NR6A1Q15406 480 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 CAMK4Q16566 473 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 CLEC16AQ2KHT3 1053 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 CACHD1Q5VU97 1274 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 C1QL3Q5VWW1 255 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 JMJD6Q6NYC1 403 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 CYB5D1Q6P9G0 228 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 PHF13Q86YI8 300 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 TP53INP2Q8IXH6 220 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 NSMCE1Q8WV22 266 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 MOCOSQ96EN8 888 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 COX14Q96I36 57 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 MCCC1Q96RQ3 725 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 KCTD15Q96SI1 283 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 RUFY1Q96T51 708 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 ZNF768Q9H5H4 540 aaKnown RBP13.76□□□□□ -0.21
ACTN1-219ENST00000556432 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 VPS18Q9P253 973 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 PCSK1NQ9UHG2 260 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 SLC5A6Q9Y289 635 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 EIF3CLB5ME19 914 aaKnown RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 TOX3O15405 576 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 VIPP01282 170 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 PTPN4P29074 926 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 NAA30Q147X3 362 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 IRGCQ6NXR0 463 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 FAM92BQ6ZTR7 304 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 MON1BQ7L1V2 547 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 ZNF765Q7L2R6 523 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 PGBD5Q8N414 524 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 SMIM14Q96QK8 99 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 EIF3CQ99613 913 aaKnown RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 SNRNP25Q9BV90 132 aaKnown RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 GPR87Q9BY21 358 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 BRD8Q9H0E9 1235 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 PDE7BQ9NP56 450 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 FAM207AQ9NSI2 230 aaPredicted RBP13.75□□□□□ -0.21
ACTN1-219ENST00000556432 OGFRQ9NZT2 677 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 SLC30A1Q9Y6M5 507 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 FBN2P35556 2912 aa13.75□□□□□ -0.21
ACTN1-219ENST00000556432 KRT86O43790 486 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 KIF1CO43896 1103 aaKnown RBP13.74□□□□□ -0.21
ACTN1-219ENST00000556432 KRT38O76015 456 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 FGF5P12034 268 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 ZNF30P17039 623 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 POU3F2P20265 443 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-219ENST00000556432 PSMA2P25787 234 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 UBE2IP63279 158 aaKnown RBP13.74□□□□□ -0.21
ACTN1-219ENST00000556432 PDE1BQ01064 536 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 PTSQ03393 145 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 ITKQ08881 620 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 TUBB3Q13509 450 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 IL10RAQ13651 578 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 ELOAQ14241 798 aaKnown RBP13.74□□□□□ -0.21
ACTN1-219ENST00000556432 SEPT7Q16181 437 aaKnown RBP13.74□□□□□ -0.21
ACTN1-219ENST00000556432 ERMARDQ5T6L9 678 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 SLC6A19Q695T7 634 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 FAM199XQ6PEV8 388 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-219ENST00000556432 TMEM26Q6ZUK4 368 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 MLKLQ8NB16 471 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 PLEKHG4BQ96PX9 1271 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 MGME1Q9BQP7 344 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 GANQ9H2C0 597 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 KLC4Q9NSK0 619 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 RARRES3Q9UL19 164 aa13.74□□□□□ -0.21
ACTN1-219ENST00000556432 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 A6NL46 340 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PDZK1P1A8MUH7 402 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 GRID2O43424 1007 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PRPSAP2O60256 369 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-219ENST00000556432 MTA2O94776 668 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 TIAF1O95411 115 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PDHA1P08559 390 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PTGIRP43119 386 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 MMP13P45452 471 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 STC1P52823 247 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 OGDHQ02218 1023 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PLA2G4EQ3MJ16 856 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PWWP2BQ6NUJ5 590 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 PRSS42Q7Z5A4 293 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 RHOT1Q8IXI2 618 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 ATPAF2Q8N5M1 289 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.73□□□□□ -0.21
ACTN1-219ENST00000556432 Q8NA96 180 aa13.73□□□□□ -0.21
ACTN1-219ENST00000556432 SIDT2Q8NBJ9 832 aaKnown RBP13.73□□□□□ -0.21
ACTN1-219ENST00000556432 TTC13Q8NBP0 860 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms