RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CNOT6Q9ULM6 557 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 SNX11Q9Y5W9 270 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 TOR1BO14657 336 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 KELP23276 732 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 PSMA3P25788 255 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 ARNTP27540 789 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 FOXN2P32314 431 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 KIAA1024LP59773 190 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 IRX4P78413 519 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 GRIK2Q13002 908 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 TCEA2Q15560 299 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 GPR33Q49SQ1 333 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 MACC1Q6ZN28 852 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 SERPINA9Q86WD7 417 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 SPATS2Q86XZ4 545 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 PIANPQ8IYJ0 282 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 OR56A4Q8NGH8 313 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 ULK4Q96C45 1275 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 OR2AG1Q9H205 316 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 MARCH4Q9P2E8 410 aaPredicted RBP13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 OAS3Q9Y6K5 1087 aaKnown RBP13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 FAM169AQ9Y6X4 670 aa13.92□□□□□ -0.18
VIPAS39-208ENST00000556412 EML5Q05BV3 1969 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 SPTY2D1-AS1A0A0U1RR47 76 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 ERVK-10P10266 1014 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 MSH3P20585 1137 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 PMLP29590 882 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 ATXN3P54252 364 aaPredicted RBP13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 FZD2Q14332 565 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 SF3A2Q15428 464 aaKnown RBP13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 CEP128Q6ZU80 1094 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 DET1Q7L5Y6 550 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 KCNMB4Q86W47 210 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 PARGQ86W56 976 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 DCP2Q8IU60 420 aaKnown RBP13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 HID1Q8IV36 788 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 NXPE1Q8N323 547 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 DCLK2Q8N568 766 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 DTX3LQ8TDB6 740 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 NAT14Q8WUY8 206 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 TSACCQ96A04 125 aaPredicted RBP13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 DCUN1D1Q96GG9 259 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 COX14Q96I36 57 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 COPS8Q99627 209 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 PHACTR1Q9C0D0 580 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 TSPYL1Q9H0U9 437 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 VPS37BQ9H9H4 285 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 FGF22Q9HCT0 170 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 SMOXQ9NWM0 555 aa13.91□□□□□ -0.18
VIPAS39-208ENST00000556412 MYBL2P10244 700 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ACRV1P26436 265 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 SSTR1P30872 391 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ARCN1P48444 511 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 VSNL1P62760 191 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 BNC1Q01954 994 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 SEMA3AQ14563 771 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 NAA30Q147X3 362 aaPredicted RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 KHDC1Q4VXA5 237 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 HSP90AA5PQ58FG0 334 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 AARS2Q5JTZ9 985 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 LDLRAP1Q5SW96 308 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 KCTD16Q68DU8 428 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ZNF470Q6ECI4 717 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 MRNIPQ6NTE8 343 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 NEPROQ6NW34 567 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 SDCCAG8Q86SQ7 713 aaPredicted RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 DDHD1Q8NEL9 900 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 OR2I1PQ8NGU4 316 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 GSDMBQ8TAX9 411 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 OR1E3Q8WZA6 343 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 RUBCNQ92622 972 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CERS2Q96G23 380 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PDXPQ96GD0 296 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 TTC1Q99614 292 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CAAP1Q9H8G2 361 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PLAC1Q9HBJ0 212 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CAPN10Q9HC96 672 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CYP4F12Q9HCS2 524 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ATXN10Q9UBB4 475 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PRKAB1Q9Y478 270 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ARHGAP33O14559 1287 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CDK14O94921 469 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CEACAM5P06731 702 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 SYPP08247 313 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 F7P08709 466 aaPredicted RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 HOXC4P09017 264 aaPredicted RBP13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 FAM153BP0C7A2 387 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 RALBP11234 206 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 ENGP17813 658 aa13.9□□□□□ -0.18
VIPAS39-208ENST00000556412 CTSKP43235 329 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms