RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 A0A1W2PPW3 197 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 OR51F1A6NGY5 319 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 J3QRK9 145 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 NOBOXO60393 691 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 RPLP2P05387 115 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 MAGP20916 626 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 IL12AP29459 219 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 HCAR3P49019 387 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 CLCNKBP51801 687 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 TXNDC5Q8NBS9 432 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 FBXL8Q96CD0 374 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 FBXL20Q96IG2 436 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 GIN1Q9NXP7 522 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 PTBP2Q9UKA9 531 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 PADI4Q9UM07 663 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 FAM220BPB1ANY3 271 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 HLA-DQB2P05538 268 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 HNRNPDQ14103 355 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF423Q2M1K9 1284 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 SH3D19Q5HYK7 790 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 CHSY3Q70JA7 882 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRPV3Q8NET8 790 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 UBASH3BQ8TF42 649 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 HMCESQ96FZ2 354 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 PANX1Q96RD7 426 aa14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 FBRSL1Q9HCM7 1045 aaKnown RBP14.94□□□□□ -0.02
ARHGEF40-207ENST00000556399 SNTNA6NMZ2 147 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 H3BN98 237 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 SDHDO14521 159 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 KPNA6O60684 536 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 CLIC3O95833 236 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 OR56A5P0C7T3 313 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 RAP2AP10114 183 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 RHOQP17081 205 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 HDCP19113 662 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 BCL2L1Q07817 233 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRIM32Q13049 653 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 PPP1R3AQ16821 1122 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 CASP12Q6UXS9 341 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 TTC30BQ8N4P2 665 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 OR10A6Q8NH74 314 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 GPR152Q8TDT2 470 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 ISOC1Q96CN7 298 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 KIFC1Q9BW19 673 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 RGS10O43665 173 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 DNAJB1P25685 340 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALDH4A1P30038 563 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 SEPHS1P49903 392 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 PGGT1BP53609 377 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 ECT2LQ008S8 904 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRIP4Q15650 581 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 FGD3Q5JSP0 725 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 TYW3Q6IPR3 259 aaKnown RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 NANOGNBQ7Z5D8 188 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 DDX53Q86TM3 631 aaKnown RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 P2RY8Q86VZ1 359 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 NELL1Q92832 810 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 ACTR3BQ9P1U1 418 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 AGO1Q9UL18 857 aaKnown RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 GIT1Q9Y2X7 761 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 KDM4FA0A1W2PPD8 638 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 NDUFS2O75306 463 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 TYMPP19971 482 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 PBLDP30039 288 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 DAG1Q14118 895 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 CARTPTQ16568 116 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 NOMO2Q5JPE7 1267 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 CCDC80Q76M96 950 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 POP5Q969H6 163 aaKnown RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 NPY6RQ99463 290 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZBED2Q9BTP6 218 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 LRRC3Q9BY71 257 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 VRTNQ9H8Y1 702 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 EIF2B4Q9UI10 523 aaKnown RBP14.93□□□□□ -0.02
ARHGEF40-207ENST00000556399 IDH3BO43837 385 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALDH1A2O94788 518 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 CRATP43155 626 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 GNPDA1P46926 289 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 GSK3BP49841 420 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 HSPA14Q0VDF9 509 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 C11orf96Q7Z7L8 435 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 MAPK15Q8TD08 544 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 MIEF1Q9NQG6 463 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZDHHC7Q9NXF8 308 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 SAMD4AQ9UPU9 718 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 IFRD1O00458 451 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 NDST3O95803 873 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ATP5C1P36542 298 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 SLC26A3P40879 764 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALDH7A1P49419 539 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 IRF8Q02556 426 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 GALNT2Q10471 571 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 PIGGQ5H8A4 983 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 CFAP52Q8N1V2 620 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 NUSAP1Q9BXS6 441 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 NFKBIZQ9BYH8 718 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 DYRK1BQ9Y463 629 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms