RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 SLC38A3Q99624 504 aa12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 CMKLR1Q99788 373 aa12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 SLC25A51Q9H1U9 297 aa12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 OSGEPL1Q9H4B0 414 aa12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 CNOT6Q9ULM6 557 aaKnown RBP12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 PCYT1BQ9Y5K3 369 aaPredicted RBP12.21□□□□□ -0.45
CCDC85C-202ENST00000554877 SCN8AQ9UQD0 1980 aa12.21□□□□□ -0.46
CCDC85C-202ENST00000554877 UNC13CQ8NB66 2214 aa12.21□□□□□ -0.46
CCDC85C-202ENST00000554877 ITPR1Q14643 2758 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 PRAMEF33A0A0G2JMD5 474 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 H7C0C1 242 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 PRAMEF10O60809 474 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 MTX2O75431 263 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 ZRANB2O95218 330 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CPNE6O95741 557 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 EML2O95834 649 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CCL4P13236 92 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 PTPN3P26045 913 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CD1CP29017 333 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CCKBRP32239 447 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 TNNT3P45378 269 aaPredicted RBP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 ATP5OP48047 213 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 UCNP55089 124 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 ZFP36L1Q07352 338 aaKnown RBP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 VAC14Q08AM6 782 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 SRSF6Q13247 344 aaKnown RBP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CLN3Q13286 438 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 EIF3IQ13347 325 aaKnown RBP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 C16orf72Q14CZ0 275 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 PRKD1Q15139 912 aaPredicted RBP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 NOMO1Q15155 1222 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 BBS12Q6ZW61 710 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 GPR26Q8NDV2 337 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CCDC112Q8NEF3 446 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 P3H4Q92791 437 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 HES6Q96HZ4 224 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 COX14Q96I36 57 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 CCDC74BQ96LY2 380 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 KLHL8Q9P2G9 620 aaPredicted RBP12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 ATXN10Q9UBB4 475 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 KLHL3Q9UH77 587 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 DNAJC16Q9Y2G8 782 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 ZNF711Q9Y462 761 aa12.2□□□□□ -0.46
CCDC85C-202ENST00000554877 TEX51A0A1B0GUA7 166 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 MACROD2A1Z1Q3 448 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 AURKAO14965 403 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 ATXN7O15265 892 aaPredicted RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 GRID2O43424 1007 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 BUD23O43709 281 aaKnown RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 DNAJC6O75061 913 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 ZNF8P17098 575 aaPredicted RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 NFKB1P19838 968 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 SEPT7Q16181 437 aaKnown RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 TFDP3Q5H9I0 405 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 ZNF569Q5MCW4 686 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 HENMT1Q5T8I9 393 aaKnown RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 AADACL2Q6P093 401 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 ZNF574Q6ZN55 896 aaPredicted RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 BZW1Q7L1Q6 419 aaKnown RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 CLEC14AQ86T13 490 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 VASH2Q86V25 355 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 NLRP8Q86W28 1048 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 SLITRK4Q8IW52 837 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 RCOR2Q8IZ40 523 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 SLC37A2Q8TED4 501 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 NCSTNQ92542 709 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 EID2BQ96D98 161 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 SCARF2Q96GP6 870 aaPredicted RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 LYSMD1Q96S90 227 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 CCNL2Q96S94 520 aaPredicted RBP12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 KCNF1Q9H3M0 494 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 KLC4Q9NSK0 619 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 FOXJ2Q9P0K8 574 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 TMEM9Q9P0T7 183 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 TBC1D29Q9UFV1 150 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 SPO11Q9Y5K1 396 aa12.19□□□□□ -0.46
CCDC85C-202ENST00000554877 IGHV1OR21-1A0A087WYE8 117 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 IGHV5-10-1A0A0J9YXX1 117 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 NDST3O95803 873 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 PYGMP11217 842 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 CSTF2P33240 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 NR2C2P49116 596 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 WNT3AP56704 352 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 COPS2P61201 443 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 HHEXQ03014 270 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 C19orf57Q0VDD7 668 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 WASHC5Q12768 1159 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 KIF5AQ12840 1032 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 LY6DQ14210 128 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 INSCQ1MX18 579 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 TMEM164Q5U3C3 297 aa12.18□□□□□ -0.46
CCDC85C-202ENST00000554877 IGF2-ASQ6U949 168 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms