RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 LIASO43766 372 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 SLC2A4P14672 509 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 GPR3P46089 330 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 CLDN6P56747 220 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 CCNG2Q16589 344 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 CHST15Q7LFX5 561 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-204ENST00000553324 LINC00523Q86TU6 105 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 LSMEM2Q8N112 164 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 PTCD2Q8WV60 388 aaKnown RBP15.18■□□□□ 0.02
SHMT2-204ENST00000553324 CCDC74AQ96AQ1 378 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 GORASP1Q9BQQ3 440 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 OR2AG1Q9H205 316 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 HOMER3Q9NSC5 361 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 ATXN10Q9UBB4 475 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 AK5Q9Y6K8 562 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 GLYATL1P3A0A0U1RQE8 302 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 OR5K4A6NMS3 321 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ERI2A8K979 691 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 RHPN2P1A8MT19 583 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 NTN3O00634 580 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 KMOO15229 486 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 KCNJ13O60928 360 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 CSO75390 466 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 CDK14O94921 469 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ECEL1O95672 775 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ZNF8P17098 575 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 MSNP26038 577 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 HADHAP40939 763 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 CLCNKAP51800 687 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 CYP4F3Q08477 520 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 TMEM115Q12893 351 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 GTF2H3Q13889 308 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 OASLQ15646 514 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 CLPPQ16740 277 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ISXQ2M1V0 245 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ATP13A5Q4VNC0 1218 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 LDLRAP1Q5SW96 308 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 KCTD11Q693B1 232 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 DRICH1Q6PGQ1 229 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ADGRG6Q86SQ4 1221 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 PROSER1Q86XN7 944 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ARL14Q8N4G2 192 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 AVL9Q8NBF6 648 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 GDAP1Q8TB36 358 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 GFM1Q96RP9 751 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 TLR10Q9BXR5 811 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 LRRN3Q9H3W5 708 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 DRG1Q9Y295 367 aaKnown RBP15.17■□□□□ 0.02
SHMT2-204ENST00000553324 JRKLQ9Y4A0 524 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 RNF215Q9Y6U7 377 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 FREM2Q5SZK8 3169 aa15.17■□□□□ 0.02
SHMT2-204ENST00000553324 CHUKO15111 745 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 USP12O75317 370 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 METTL18O95568 372 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 AP2A1O95782 977 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 GAS8O95995 478 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 VCLP18206 1134 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 FDFT1P37268 417 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 CCL7P80098 99 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 C4orf22Q6V702 233 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 LRRTM4Q86VH4 590 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 CCNJLQ8IV13 435 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 NAGSQ8N159 534 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 CCDC89Q8N998 374 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 MDM1Q8TC05 714 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 ZNF398Q8TD17 642 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 C1orf54Q8WWF1 131 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 ATG4AQ8WYN0 398 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 TMEM74Q96NL1 305 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 APOL2Q9BQE5 337 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 STN1Q9H668 368 aaKnown RBP15.16■□□□□ 0.02
SHMT2-204ENST00000553324 PLEKHM1Q9Y4G2 1056 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 ST14Q9Y5Y6 855 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 ARL5AQ9Y689 179 aa15.16■□□□□ 0.02
SHMT2-204ENST00000553324 PTPRBP23467 1997 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 IFNB1P01574 187 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 FGGP02679 453 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 RPLP0P05388 317 aaKnown RBP15.15■□□□□ 0.02
SHMT2-204ENST00000553324 ACP5P13686 325 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 FASLGP48023 281 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 LSSP48449 732 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 GDF10P55107 478 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 LAMB3Q13751 1172 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 NR1D2Q14995 579 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 DENND5AQ6IQ26 1287 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 FAM151BQ6UXP7 276 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 ZNF438Q7Z4V0 828 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 Q8N9G6 341 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-204ENST00000553324 OR4K2Q8NGD2 314 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 SH3KBP1Q96B97 665 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 ZNF514Q96K75 400 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-204ENST00000553324 TIMM29Q9BSF4 260 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 STRADBQ9C0K7 418 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 SYNDIG1Q9H7V2 258 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 SMOXQ9NWM0 555 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 PAK5Q9P286 719 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 RABGEF1Q9UJ41 708 aa15.15■□□□□ 0.02
SHMT2-204ENST00000553324 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms