RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 OR1D5P58170 312 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 TLE3Q04726 772 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 MPP3Q13368 585 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 NOMO1Q15155 1222 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 AMZ1Q400G9 498 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 MAP9Q49MG5 647 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 ALS2CLQ60I27 953 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 KDELC1Q6UW63 502 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 CHST15Q7LFX5 561 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-207ENST00000553290 KIAA1328Q86T90 577 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 SLITRK4Q8IW52 837 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 TXLNBQ8N3L3 684 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 ACRBPQ8NEB7 543 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 GLYATL1Q969I3 302 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 NAF1Q96HR8 494 aaKnown RBP12.83□□□□□ -0.36
ACTN1-207ENST00000553290 MRGPRX2Q96LB1 330 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 PLEKHG4BQ96PX9 1271 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 OSBPL8Q9BZF1 889 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 TRIM39Q9HCM9 518 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 HACD3Q9P035 362 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 IMPACTQ9P2X3 320 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 PTPRQQ9UMZ3 2332 aa12.83□□□□□ -0.36
ACTN1-207ENST00000553290 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 GRID2O43424 1007 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 JMJD7P0C870 316 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SLC2A4P14672 509 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 BPIP17213 487 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 HLA-DPA1P20036 260 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 FASLGP48023 281 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SQSTM1Q13501 440 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SLC1A5Q15758 541 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SIRPB2Q5JXA9 342 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 ZDHHC20Q5W0Z9 365 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 PHYKPLQ8IUZ5 450 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SFRP1Q8N474 314 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 LRRC57Q8N9N7 239 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 FCRL3Q96P31 734 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-207ENST00000553290 CMKLR1Q99788 373 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 DPYSL5Q9BPU6 564 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 LACRTQ9GZZ8 138 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 OR2AG1Q9H205 316 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
ACTN1-207ENST00000553290 AKAP7Q9P0M2 348 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-207ENST00000553290 ATXN10Q9UBB4 475 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 RSPH14Q9UHP6 348 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 PRKAB1Q9Y478 270 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 LOXL2Q9Y4K0 774 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 PCDHGA7Q9Y5G6 932 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 SPO11Q9Y5K1 396 aa12.82□□□□□ -0.36
ACTN1-207ENST00000553290 IGSF10Q6WRI0 2623 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 OR5K4A6NMS3 321 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 AURKAO14965 403 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 CHUKO15111 745 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 KLK10O43240 276 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ANXA9O76027 345 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 TJP3O95049 919 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ACP5P13686 325 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ZNF8P17098 575 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 RBL1P28749 1068 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 CD1CP29017 333 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 CDC25BP30305 580 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 CLCNKAP51800 687 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 GEMP55040 296 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 GPLD1P80108 840 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 OTUD4Q01804 1114 aaKnown RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 PHF19Q5T6S3 580 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ITPRIPL1Q6GPH6 555 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 IYDQ6PHW0 289 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 USP53Q70EK8 1073 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 GPR155Q7Z3F1 870 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 TMPRSS9Q7Z410 1059 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ADGRG6Q86SQ4 1221 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 TMEM139Q8IV31 216 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 CDKL3Q8IVW4 592 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 SYCE1Q8N0S2 351 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 SLC25A41Q8N5S1 370 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 AVL9Q8NBF6 648 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 IPMKQ8NFU5 416 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ACTL9Q8TC94 416 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 DTX3LQ8TDB6 740 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 SH3KBP1Q96B97 665 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 VPS35Q96QK1 796 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 HERPUD2Q9BSE4 406 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 FSD1LQ9BXM9 530 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 GBA3Q9H227 469 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 STN1Q9H668 368 aaKnown RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 RDH14Q9HBH5 336 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 BPIFA1Q9NP55 256 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ARFGAP3Q9NP61 516 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 SARS2Q9NP81 518 aaKnown RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 KCNK4Q9NYG8 393 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 TBC1D29Q9UFV1 150 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 AMFRQ9UKV5 643 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 KCNK6Q9Y257 313 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 PCYT1BQ9Y5K3 369 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-207ENST00000553290 ADGRG1Q9Y653 693 aa12.81□□□□□ -0.36
ACTN1-207ENST00000553290 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms