RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SERPINA4P29622 427 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 CCR10P46092 362 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PGGT1BP53609 377 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PKNOX1P55347 436 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 SLC34A1Q06495 639 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PCDH1Q08174 1060 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 NFATC2Q13469 925 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 SMAD1Q15797 465 aaKnown RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ARHGAP15Q53QZ3 475 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 GPRC6AQ5T6X5 926 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 LDB1Q86U70 411 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ADIPOR2Q86V24 386 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 RBFAQ8N0V3 343 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ULK4Q96C45 1275 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 MRGPRX3Q96LB0 322 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 LENG8Q96PV6 779 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF382Q96SR6 550 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 TCF25Q9BQ70 676 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 TRPV4Q9HBA0 871 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 RAD18Q9NS91 495 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 SMPD4Q9NXE4 827 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 OBP2AQ9NY56 170 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 CDH22Q9UJ99 828 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PCTPQ9UKL6 214 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 CRYL1Q9Y2S2 319 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 CCL22O00626 93 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 CASQ2O14958 399 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 DCXO43602 365 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ECI2O75521 394 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 RHOBTB1O94844 696 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ACRP10323 421 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ZNF30P17039 623 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 HLA-FP30511 346 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 HNF1BP35680 557 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ABL2P42684 1182 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 IL2P60568 153 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 C1QTNF8P60827 252 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 SH3BP2P78314 561 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 KCNC3Q14003 757 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 KPNB1Q14974 876 aaKnown RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 CARD16Q5EG05 197 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 PIGGQ5H8A4 983 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ELMSAN1Q6PJG2 1045 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 LINGO4Q6UY18 593 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 TPGS1Q6ZTW0 290 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 NEK10Q6ZWH5 1172 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 LYSMD3Q7Z3D4 306 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ZSWIM9Q86XI8 627 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 IRF7Q92985 503 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 ZFYVE1Q9HBF4 777 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 IL26Q9NPH9 171 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 STOML1Q9UBI4 398 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 GNPTGQ9UJJ9 305 aa9.9□□□□□ -0.82
RAB5B-206ENST00000549505 A0A1W2PRU2 124 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 NEMP2A6NFY4 417 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ZNF197O14709 1029 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 PRAMEF12O95522 483 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 CISD3P0C7P0 127 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 GGT5P36269 586 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 CYLC2Q14093 348 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 GSTA3Q16772 222 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 PTPRNQ16849 979 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SPATA19Q7Z5L4 167 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SPATA6LQ8N4H0 392 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 DDI1Q8WTU0 396 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ZNF707Q96C28 371 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 TTC1Q99614 292 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 GPR21Q99679 349 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 WDR55Q9H6Y2 383 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SPHK2Q9NRA0 654 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 TDP1Q9NUW8 608 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 OARD1Q9Y530 152 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 TNPO3Q9Y5L0 923 aaKnown RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 K7ERQ8 282 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SLC9A3R1O14745 358 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 LIN7AO14910 233 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ENTPD5O75356 428 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ASLP04424 464 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ACADSP16219 412 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 ZNF7P17097 686 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 BPIP17213 487 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 GPX3P22352 226 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SPAM1P38567 509 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 CLCN2P51788 898 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 HK3P52790 923 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 LRP8Q14114 963 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 KBTBD6Q86V97 674 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 AHI1Q8N157 1196 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 PTGR2Q8N8N7 351 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 KYQ8NBH2 561 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 WFIKKN2Q8TEU8 576 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 N4BP2L2Q92802 583 aaPredicted RBP9.89□□□□□ -0.83
RAB5B-206ENST00000549505 SLC30A3Q99726 388 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 NUF2Q9BZD4 464 aa9.89□□□□□ -0.83
RAB5B-206ENST00000549505 BRINP2Q9C0B6 783 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms