RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 SP110Q9HB58 689 aa9.82□□□□□ -0.84
SMARCD1-205ENST00000548573 PRDM5Q9NQX1 630 aaPredicted RBP9.82□□□□□ -0.84
SMARCD1-205ENST00000548573 TMEM248Q9NWD8 314 aa9.82□□□□□ -0.84
SMARCD1-205ENST00000548573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.82□□□□□ -0.842e-10■■□□□ 13.5
SMARCD1-205ENST00000548573 ZIM2Q9NZV7 527 aa9.82□□□□□ -0.84
SMARCD1-205ENST00000548573 GNPTGQ9UJJ9 305 aa9.82□□□□□ -0.84
SMARCD1-205ENST00000548573 LCHNA4D1U4 455 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SOBPA7XYQ1 873 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SYCE1LA8MT33 242 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 STX16O14662 325 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TNFRSF10BO14763 440 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 FOXD2O60548 495 aaPredicted RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TULP3O75386 442 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 RPP40O75818 363 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 PRSS23O95084 383 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CHEK2O96017 543 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 FGF1P05230 155 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 UROSP10746 265 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 HAPLN1P10915 354 aaPredicted RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CDH1P12830 882 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 HLA-DPA1P20036 260 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CD247P20963 164 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 UGT1A1P22309 533 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 UGT1A4P22310 534 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 HRH2P25021 359 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TPP2P29144 1249 aaPredicted RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 HOXC8P31273 242 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 UGT1A3P35503 534 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 UGT1A5P35504 534 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SCNN1GP51170 649 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ALDH3A2P51648 485 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 POLR2JP52435 117 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 PHEXP78562 749 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SEMA3AQ14563 771 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 NEDD8Q15843 81 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TYSND1Q2T9J0 566 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 BROXQ5VW32 411 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 NANOGP8Q6NSW7 305 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 XKR5Q6UX68 686 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 DCDC5Q6ZRR9 648 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ANKRD23Q86SG2 305 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TLK2Q86UE8 772 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 LRRTM3Q86VH5 581 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 RIMKLAQ8IXN7 391 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 NPLOC4Q8TAT6 608 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TRUB1Q8WWH5 349 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TANKQ92844 425 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 VPS33AQ96AX1 596 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 NRBF2Q96F24 287 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SLC39A13Q96H72 371 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TEX37Q96LM6 180 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TMEM209Q96SK2 561 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 C1orf50Q9BV19 199 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 KATNAL1Q9BW62 490 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 LRRC3Q9BY71 257 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TRIM8Q9BZR9 551 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ZYG11BQ9C0D3 744 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 NAA50Q9GZZ1 169 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 NANOGQ9H9S0 305 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 GPN2Q9H9Y4 310 aaPredicted RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CATSPERZQ9NTU4 200 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 MAGEL2Q9UJ55 1249 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TLR6Q9Y2C9 796 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 KCTD3Q9Y597 815 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 PCDHGA11Q9Y5H2 935 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 MRPL42Q9Y6G3 142 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 FAM234BA2RU67 622 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CCDC162PA2VCL2 907 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SUPT3HB4E1H0 165 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 H0Y858 1186 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 KLK8O60259 260 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ATP6V1G1O75348 118 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 SUPT3HO75486 399 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 BAIAP3O94812 1187 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ZBTB11O95625 1053 aaPredicted RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ESRRBO95718 433 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 MLYCDO95822 493 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 C1RP00736 705 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 EPOP01588 193 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 MATN1P21941 496 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 PAX3P23760 479 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 MAP4P27816 1152 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 PGFP49763 221 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CPT1AP50416 773 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 BMXP51813 675 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 STC1P52823 247 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ARSFP54793 590 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 UFM1P61960 85 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 ERVK-8P63133 956 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 BNIP3Q12983 259 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 CBX3Q13185 183 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 PLCL1Q15111 1095 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TGFBIQ15582 683 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 FUT11Q495W5 492 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 RBM48Q5RL73 367 aaKnown RBP9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TAF2Q6P1X5 1199 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TXNDC11Q6PKC3 985 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 TBPL2Q6SJ96 375 aa9.81□□□□□ -0.84
SMARCD1-205ENST00000548573 HID1Q8IV36 788 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms