RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 C4orf22Q6V702 233 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 TRIM74Q86UV6 250 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 PHYKPLQ8IUZ5 450 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 RASGEF1CQ8N431 466 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 BLOC1S5Q8TDH9 187 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 ATG4AQ8WYN0 398 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 ATXN10Q9UBB4 475 aa23.04■■□□□ 1.28
CTDSP2-203ENST00000547701 DMXL2Q8TDJ6 3036 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 CPED1A4D0V7 1026 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 PRR19A6NJB7 356 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 GAPDHSO14556 408 aaPredicted RBP23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 SUN1O94901 812 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 CRTAMO95727 393 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 ATP1A1P05023 1023 aaKnown RBP23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 FDFT1P37268 417 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 TARDBPQ13148 414 aaKnown RBP eCLIP23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 CLPPQ16740 277 aaPredicted RBP23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 ATP13A5Q4VNC0 1218 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 CCDC157Q569K6 752 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 ADGRG6Q86SQ4 1221 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 LINC00523Q86TU6 105 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 MAPK15Q8TD08 544 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 ABCG4Q9H172 646 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 DPEP2Q9H4A9 486 aa23.03■■□□□ 1.28
CTDSP2-203ENST00000547701 CACNA1BQ00975 2339 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 KMT2BQ9UMN6 2715 aaPredicted RBP23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 F5H423 210 aaPredicted RBP23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 H7C0S8 307 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 STX7O15400 261 aaKnown RBP23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 KCNJ13O60928 360 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 ASMTLO95671 621 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 FGGP02679 453 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 AK4P27144 223 aaPredicted RBP23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 DOK6Q6PKX4 331 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 NAGSQ8N159 534 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 DDHD1Q8NEL9 900 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 ZDHHC1Q8WTX9 485 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 PBKQ96KB5 322 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 DEPDC7Q96QD5 511 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 CCDC3Q9BQI4 270 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 BPIFA1Q9NP55 256 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 GULP1Q9UBP9 304 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 ZNF148Q9UQR1 794 aa23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 PCYT1BQ9Y5K3 369 aaPredicted RBP23.02■■□□□ 1.28
CTDSP2-203ENST00000547701 ANKRD11Q6UB99 2663 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 GLYATL1P3A0A0U1RQE8 302 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 A6NCN8 305 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 TRABD2BA6NFA1 517 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 GRID2O43424 1007 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 LDB2O43679 373 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 ZNF8P17098 575 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 ACTN2P35609 894 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 HADHAP40939 763 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 GPR3P46089 330 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 FASLGP48023 281 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 SEMA5AQ13591 1074 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 LDLRAP1Q5SW96 308 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 ALS2CLQ60I27 953 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 C1orf54Q8WWF1 131 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 PAK5Q9P286 719 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 ZNHIT2Q9UHR6 403 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 GPSM3Q9Y4H4 160 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 ARL5AQ9Y689 179 aa23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 DNMT3AQ9Y6K1 912 aaPredicted RBP23.01■■□□□ 1.27
CTDSP2-203ENST00000547701 FAM149AA5PLN7 773 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 CES2O00748 559 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 ACTR1BP42025 376 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 ZNF140P52738 457 aaPredicted RBP23■■□□□ 1.27
CTDSP2-203ENST00000547701 ACTR1AP61163 376 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 XIAPP98170 497 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 SQSTM1Q13501 440 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 IGF2-ASQ6U949 168 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 CCDC74AQ96AQ1 378 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 TIMM29Q9BSF4 260 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 SIRPGQ9P1W8 387 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 RABGEF1Q9UJ41 708 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 RIMKLBQ9ULI2 386 aa23■■□□□ 1.27
CTDSP2-203ENST00000547701 BPTFQ12830 3046 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 OR5K4A6NMS3 321 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 KMOO15229 486 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 MSNP26038 577 aaKnown RBP22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 TMEM115Q12893 351 aaPredicted RBP22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 OLIG2Q13516 323 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 CHRNA6Q15825 494 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 ISXQ2M1V0 245 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 SLC30A9Q6PML9 568 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 RBM44Q6ZP01 1051 aaKnown RBP22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 SFRP1Q8N474 314 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 ARL14Q8N4G2 192 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 ZNF398Q8TD17 642 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 APOL2Q9BQE5 337 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 ZCCHC2Q9C0B9 1178 aaKnown RBP22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 OR2AG1Q9H205 316 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 ETNK1Q9HBU6 452 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 LRIT1Q9P2V4 623 aa22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 URB1O60287 2271 aaKnown RBP22.99■■□□□ 1.27
CTDSP2-203ENST00000547701 KLHL33A6NCF5 533 aa22.98■■□□□ 1.27
CTDSP2-203ENST00000547701 B4DGG1 531 aa22.98■■□□□ 1.27
CTDSP2-203ENST00000547701 TMX2-CTNND1H3BSU7 103 aa22.98■■□□□ 1.27
CTDSP2-203ENST00000547701 ZW10O43264 779 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms