RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GATAD2AQ86YP4 633 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 MPP5Q8N3R9 675 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 TBATAQ96M53 351 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 KIFC1Q9BW19 673 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SLC13A1Q9BZW2 595 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SUDS3Q9H7L9 328 aaPredicted RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 MRM3Q9HC36 420 aaKnown RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 CYP4F12Q9HCS2 524 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SMOXQ9NWM0 555 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 UCKL1Q9NWZ5 548 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 VPS18Q9P253 973 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SNX24Q9Y343 169 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 PCNX2A6NKB5 2137 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 AGAP14A8MT82 685 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SMAPO00193 183 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SLC30A4O14863 429 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 TNFP01375 233 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 IVLP07476 585 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 MC4RP32245 332 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ITGA8P53708 1063 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SUZ12Q15022 739 aaKnown RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ARMC3Q5W041 872 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 DUPD1Q68J44 220 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 MICALCLQ6ZW33 695 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 RD3Q7Z3Z2 195 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SNX20Q7Z614 316 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SLC25A45Q8N413 288 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ZNF548Q8NEK5 533 aaPredicted RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 LRRC61Q9BV99 259 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ASB8Q9H765 288 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 TRIM39Q9HCM9 518 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ARFGAP3Q9NP61 516 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SUFUQ9UMX1 484 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SOX13Q9UN79 622 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 GOLGA4Q13439 2230 aaKnown RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 CTAGE15A4D2H0 777 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 SDR42E2A6NKP2 422 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 ESPNB1AK53 854 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 ASMTLO95671 621 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 CTAGE8P0CG41 777 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 RSPO4Q2I0M5 234 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 KHDC1Q4VXA5 237 aaKnown RBP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 PRRT3Q5FWE3 981 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 ZNF648Q5T619 568 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 CTAGE6Q86UF2 777 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 CTAGE4Q8IX94 777 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 AGGF1Q8N302 714 aaeCLIP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 MMGT1Q8N4V1 131 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 CARS2Q9HA77 564 aaKnown RBP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 TREX1Q9NSU2 369 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 MOSPD1Q9UJG1 213 aa20.28■□□□□ 0.84
HMGA2-211ENST00000545998 CDV3Q9UKY7 258 aaKnown RBP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 ZFC3H1O60293 1989 aaKnown RBP20.28■□□□□ 0.84
HMGA2-211ENST00000545998 CCDC162PA2VCL2 907 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 TM4SF5O14894 197 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 AQP9O43315 295 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 DNAJC6O75061 913 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 ITGALP20701 1170 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 DEKP35659 375 aaKnown RBP20.27■□□□□ 0.84
HMGA2-211ENST00000545998 LDLRAP1Q5SW96 308 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 GPRC6AQ5T6X5 926 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 C8orf74Q6P047 294 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 ADGRG6Q86SQ4 1221 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 NOA1Q8NC60 698 aaKnown RBP20.27■□□□□ 0.84
HMGA2-211ENST00000545998 DDHD1Q8NEL9 900 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 HDAC10Q969S8 669 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 LRRC1Q9BTT6 524 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 OR2AG1Q9H205 316 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 WHRNQ9P202 907 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 ATXN10Q9UBB4 475 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 SPASTQ9UBP0 616 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 ANAPC5Q9UJX4 755 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 UTP11Q9Y3A2 253 aaKnown RBP20.27■□□□□ 0.84
HMGA2-211ENST00000545998 SLC30A1Q9Y6M5 507 aa20.27■□□□□ 0.84
HMGA2-211ENST00000545998 ARHGEF17Q96PE2 2063 aaPredicted RBP20.26■□□□□ 0.83
HMGA2-211ENST00000545998 SCAMP1O15126 338 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 FLRT2O43155 660 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 MTX2O75431 263 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 ZNF8P17098 575 aaPredicted RBP20.26■□□□□ 0.83
HMGA2-211ENST00000545998 NMBRP28336 390 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 GNPDA1P46926 289 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 GPR33Q49SQ1 333 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 FNBP1LQ5T0N5 605 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 MARK2Q7KZI7 788 aaKnown RBP20.26■□□□□ 0.83
HMGA2-211ENST00000545998 PIP4P1Q86T03 277 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 CEP112Q8N8E3 955 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 BBOF1Q8ND07 529 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 GDAP1Q8TB36 358 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 LMX1AQ8TE12 382 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 SIGLEC10Q96LC7 697 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 CLPBQ9H078 707 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 RAB17Q9H0T7 212 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 TMEM168Q9H0V1 697 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 DPH5Q9H2P9 285 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 FAM96AQ9H5X1 160 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 BTBD3Q9Y2F9 522 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 PCYT1BQ9Y5K3 369 aaPredicted RBP20.26■□□□□ 0.83
HMGA2-211ENST00000545998 CSNK1G3Q9Y6M4 447 aa20.26■□□□□ 0.83
HMGA2-211ENST00000545998 TRBV5-4A0A0C4DH59 114 aa20.25■□□□□ 0.83
HMGA2-211ENST00000545998 MAGEB16A2A368 324 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms