RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 IRAK2O43187 625 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 BNIP3LO60238 219 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 KPNA6O60684 536 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 USP12O75317 370 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 EEDO75530 441 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 F2P00734 622 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 LDLRP01130 860 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 AMHP03971 560 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ENO2P09104 434 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ODC1P11926 461 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 GFAPP14136 432 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 HLA-DPA1P20036 260 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FDXRP22570 491 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 PSMA3P25788 255 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RFC2P35250 354 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 GLRBP48167 497 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CD97P48960 835 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ERFP50548 548 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 MAP3K7CLP57077 242 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 GABARAPL2P60520 117 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TMED1Q13445 227 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RAB33AQ14088 237 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RPS6KA2Q15349 733 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CRY1Q16526 586 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RFX4Q33E94 735 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 UBXN11Q5T124 520 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FAM72AQ5TYM5 149 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 HECTD2Q5U5R9 776 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TTC23Q5W5X9 447 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 KANK2Q63ZY3 851 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FAM72DQ6L9T8 149 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ESRP1Q6NXG1 681 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 METTL2BQ6P1Q9 378 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TAF2Q6P1X5 1199 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CNSTQ6PJW8 725 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 PAOXQ6QHF9 649 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 KDELC1Q6UW63 502 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RNF165Q6ZSG1 346 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FAM43BQ6ZT52 329 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 USP51Q70EK9 711 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FAM72BQ86X60 149 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CILP2Q8IUL8 1156 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CEP97Q8IW35 865 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ARHGAP12Q8IWW6 846 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 UMODL1-AS1Q8N2C9 162 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SFRP1Q8N474 314 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TTC30BQ8N4P2 665 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 DPP10Q8N608 796 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TEX26Q8N6G2 289 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RTL3Q8N8U3 475 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FAM47BQ8NA70 645 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 DDHD1Q8NEL9 900 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 IPMKQ8NFU5 416 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 OR6J1Q8NGC5 347 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RAB2BQ8WUD1 216 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TRUB1Q8WWH5 349 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TADA1Q96BN2 335 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 IMP4Q96G21 291 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF668Q96K58 619 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 COX4I2Q96KJ9 171 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SENP8Q96LD8 212 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 UROC1Q96N76 676 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SERPINB11Q96P15 392 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SLC30A3Q99726 388 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 OLFM1Q99784 485 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SMOQ99835 787 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 C19orf43Q9BQ61 176 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FICDQ9BVA6 458 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CEP41Q9BYV8 373 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 BRINP2Q9C0B6 783 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SMOC2Q9H3U7 446 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 NXF3Q9H4D5 531 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF576Q9H609 170 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 NOL11Q9H8H0 719 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 GPN2Q9H9Y4 310 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CXorf21Q9HAI6 301 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TXNRD2Q9NNW7 524 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RIC8BQ9NVN3 520 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RBM22Q9NW64 420 aaKnown RBP eCLIP6.44□□□□□ -1.384e-38■■■■□ 24.6
SNHG1-225ENST00000545920 MAGEL2Q9UJ55 1249 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ANAPC2Q9UJX6 822 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 PAIP2BQ9ULR5 123 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 PIN4Q9Y237 131 aaKnown RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 TLR6Q9Y2C9 796 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF510Q9Y2H8 683 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 WDR37Q9Y2I8 494 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 GIT1Q9Y2X7 761 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FNDC1Q4ZHG4 1894 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CITO14578 2027 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF236Q9UL36 1845 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 CCDC78A2IDD5 438 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 HAS3O00219 553 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 KERAO60938 352 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 DEAF1O75398 565 aaPredicted RBP6.43□□□□□ -1.38
SNHG1-225ENST00000545920 GMNNO75496 209 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 PRSS23O95084 383 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 FKBP9O95302 570 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 NTRK1P04629 796 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 ITGB2P05107 769 aa6.43□□□□□ -1.38
SNHG1-225ENST00000545920 FGF1P05230 155 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms