RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MTSS1O43312 755 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 NDST3O95803 873 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 ATP1A1P05023 1023 aaKnown RBP15.47■□□□□ 0.07
VPS33A-206ENST00000542310 COMTP21964 271 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 MAPK10P53779 464 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 HHEXQ03014 270 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 KIR2DS5Q14953 304 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 TEX44Q53QW1 395 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 TMEM71Q6P5X7 295 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 MFSD7Q6UXD7 560 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 TMC3Q7Z5M5 1100 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 SLC9B2Q86UD5 537 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 PHYKPLQ8IUZ5 450 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 RNF25Q96BH1 459 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-206ENST00000542310 EID2BQ96D98 161 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 SLC38A3Q99624 504 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 DDA1Q9BW61 102 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 SPATA16Q9BXB7 569 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 CEP41Q9BYV8 373 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 GLOD4Q9HC38 313 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 PDP2Q9P2J9 529 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 PCDHB11Q9Y5F2 797 aa15.47■□□□□ 0.07
VPS33A-206ENST00000542310 PCYT1BQ9Y5K3 369 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-206ENST00000542310 GCN1Q92616 2671 aaKnown RBP15.46■□□□□ 0.07
VPS33A-206ENST00000542310 STMND1H3BQB6 276 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 GRID2O43424 1007 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 LCA5LO95447 670 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 ACP5P13686 325 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 F3P13726 295 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 PTPN3P26045 913 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 RAB15P59190 212 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 DYNLT1P63172 113 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 TFDP3Q5H9I0 405 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 MANEAQ5SRI9 462 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 IYDQ6PHW0 289 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 WDR74Q6RFH5 385 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-206ENST00000542310 XKR5Q6UX68 686 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 USP53Q70EK8 1073 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 CHST15Q7LFX5 561 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-206ENST00000542310 RNF214Q8ND24 703 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 RCBTB1Q8NDN9 531 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 TFB1MQ8WVM0 346 aaKnown RBP15.46■□□□□ 0.07
VPS33A-206ENST00000542310 GLYATL1Q969I3 302 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 SGF29Q96ES7 293 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 AHCYL2Q96HN2 611 aaKnown RBP15.46■□□□□ 0.07
VPS33A-206ENST00000542310 TEKT5Q96M29 485 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 PLEKHG4BQ96PX9 1271 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 TAAR9Q96RI9 348 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-206ENST00000542310 ZMYND15Q9H091 742 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 TRIM39Q9HCM9 518 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 ATXN10Q9UBB4 475 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 TBC1D29Q9UFV1 150 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 KCNK6Q9Y257 313 aa15.46■□□□□ 0.07
VPS33A-206ENST00000542310 CFAP46Q8IYW2 2715 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 LILRA5A6NI73 299 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 B4E171 279 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 CHUKO15111 745 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 EFSO43281 561 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 EML2O95834 649 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 MT-CYBP00156 380 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-206ENST00000542310 ITGB2P05107 769 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 FGF3P11487 239 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-206ENST00000542310 CCL4P13236 92 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 CSTF2P33240 577 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPS33A-206ENST00000542310 TSPAN7P41732 249 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 NOP2P46087 812 aaKnown RBP15.45■□□□□ 0.06
VPS33A-206ENST00000542310 TGIF1Q15583 401 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 PCSK7Q16549 785 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 NKAIN2Q5VXU1 208 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 KIAA1614Q5VZ46 1190 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 C11orf63Q6NUN7 778 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 SPOCD1Q6ZMY3 1216 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 GPR26Q8NDV2 337 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 VPS35Q96QK1 796 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 VAT1Q99536 393 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 TIMM29Q9BSF4 260 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 GPR63Q9BZJ6 419 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 TRABDQ9H4I3 376 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 UCK1Q9HA47 277 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 LUC7LQ9NQ29 371 aaKnown RBP15.45■□□□□ 0.06
VPS33A-206ENST00000542310 SHOC2Q9UQ13 582 aa15.45■□□□□ 0.06
VPS33A-206ENST00000542310 HELZ2Q9BYK8 2649 aaKnown RBP15.44■□□□□ 0.06
VPS33A-206ENST00000542310 VEGFDO43915 354 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 CST8O60676 142 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 SLC25A14O95258 325 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-206ENST00000542310 EPOP01588 193 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 PECAM1P16284 738 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ZNF8P17098 575 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ATP1A2P50993 1020 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 PPP2R5EQ16537 467 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ZDHHC20Q5W0Z9 365 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ALS2CLQ60I27 953 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ADGRG6Q86SQ4 1221 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ZFAND4Q86XD8 727 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 CCDC170Q8IYT3 715 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 TC2NQ8N9U0 490 aa15.44■□□□□ 0.06
VPS33A-206ENST00000542310 ZSCAN1Q8NBB4 408 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms