RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 RGSL1A5PLK6 1076 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 GOLGA6L3A6NEY3 463 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 ACP5P13686 325 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 UBE2IP63279 158 aaKnown RBP26.49■■□□□ 1.83
CHFR-218ENST00000540963 HENMT1Q5T8I9 393 aaKnown RBP26.49■■□□□ 1.83
CHFR-218ENST00000540963 PHYKPLQ8IUZ5 450 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 TEKT4Q8WW24 435 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 TBC1D10AQ9BXI6 508 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 PRKAB1Q9Y478 270 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 PCDHGA6Q9Y5G7 932 aa26.49■■□□□ 1.83
CHFR-218ENST00000540963 RFPL1O75677 317 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 MYBL1P10243 752 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 XRCC1P18887 633 aaPredicted RBP26.48■■□□□ 1.83
CHFR-218ENST00000540963 MYL5Q02045 173 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 FOXM1Q08050 763 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 SMTNL2Q2TAL5 461 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 ASB18Q6ZVZ8 466 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 FATE1Q969F0 183 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 GBP4Q96PP9 640 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 SMIM14Q96QK8 99 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 WDR24Q96S15 920 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 TDRD1Q9BXT4 1180 aaKnown RBP26.48■■□□□ 1.83
CHFR-218ENST00000540963 RCOR3Q9P2K3 495 aaPredicted RBP26.48■■□□□ 1.83
CHFR-218ENST00000540963 CROTQ9UKG9 612 aa26.48■■□□□ 1.83
CHFR-218ENST00000540963 GPR89AB7ZAQ6 455 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 NUAK1O60285 661 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 CLDN7O95471 211 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 GPR89BP0CG08 455 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 RARAP10276 462 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 SPINT3P49223 89 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 PMS2P54278 862 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 ITKQ08881 620 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 APLFQ8IW19 511 aaPredicted RBP26.47■■□□□ 1.83
CHFR-218ENST00000540963 AOPEPQ8N6M6 819 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 MAML1Q92585 1016 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 HSPH1Q92598 858 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 ZNF653Q96CK0 615 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 FAM83DQ9H4H8 585 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 ZNF768Q9H5H4 540 aaKnown RBP26.47■■□□□ 1.83
CHFR-218ENST00000540963 PCDH18Q9HCL0 1135 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 ANO10Q9NW15 660 aa26.47■■□□□ 1.83
CHFR-218ENST00000540963 GRID2O43424 1007 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 SNX2O60749 519 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 ZNF28P17035 718 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 CDK11BP21127 795 aaKnown RBP26.46■■□□□ 1.83
CHFR-218ENST00000540963 ERV3-1Q14264 604 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 PIGHQ14442 188 aaPredicted RBP26.46■■□□□ 1.83
CHFR-218ENST00000540963 TIGD7Q6NT04 549 aaPredicted RBP26.46■■□□□ 1.83
CHFR-218ENST00000540963 CYB5D1Q6P9G0 228 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 STAMBPL1Q96FJ0 436 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 PLEKHG4BQ96PX9 1271 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 PKD2L2Q9NZM6 624 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 OGFRQ9NZT2 677 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 CHKBQ9Y259 395 aa26.46■■□□□ 1.83
CHFR-218ENST00000540963 RP1L1Q8IWN7 2480 aaPredicted RBP26.46■■□□□ 1.83
CHFR-218ENST00000540963 FADS2P1A8MWK0 482 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 K7EM74 188 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 PRLP01236 227 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 MT-ND3P03897 115 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 KRT7P08729 469 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 NR1D1P20393 614 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 GARSP41250 739 aaKnown RBP26.45■■□□□ 1.82
CHFR-218ENST00000540963 MLLT10P55197 1068 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 GFERP55789 205 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 SASS6Q6UVJ0 657 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 TMEM26Q6ZUK4 368 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 GALNT6Q8NCL4 622 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 SEC14L1Q92503 715 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 HAUS4Q9H6D7 363 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 TMEM63CQ9P1W3 806 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 ADGRG1Q9Y653 693 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 NOTCH2Q04721 2471 aa26.45■■□□□ 1.82
CHFR-218ENST00000540963 VPS4BO75351 444 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 UBXN7O94888 489 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 NDUFA10O95299 355 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 CCNYL3P0C7X3 344 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 FGF5P12034 268 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 PRKCIP41743 596 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 ZNF165P49910 485 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 GALNT2Q10471 571 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 IHHQ14623 411 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 STX1AQ16623 288 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 ANKRD20A8PQ5CZ79 823 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 GALNT11Q8NCW6 608 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 CCHCR1Q8TD31 782 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 OR6C1Q96RD1 312 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 PCDH9Q9HC56 1237 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 AIPL1Q9NZN9 384 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 TLK1Q9UKI8 766 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 VPS4AQ9UN37 437 aa26.44■■□□□ 1.82
CHFR-218ENST00000540963 UNC79Q9P2D8 2635 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 C1orf232A0A0U1RR37 186 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 MATN3O15232 486 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 CREG1O75629 220 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 FURINP09958 794 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 TCF4P15884 667 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 DSC2Q02487 901 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 ASIC2Q16515 512 aa26.43■■□□□ 1.82
CHFR-218ENST00000540963 LARP7Q4G0J3 582 aaKnown RBP eCLIP26.43■■□□□ 1.82
CHFR-218ENST00000540963 ZNF571Q7Z3V5 609 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms