RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 KCTD8Q6ZWB6 473 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 PROSER1Q86XN7 944 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 RBM12BQ8IXT5 1001 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 OFCC1Q8IZS5 231 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 BRSK1Q8TDC3 778 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 BLOC1S5Q8TDH9 187 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 CNDP2Q96KP4 475 aaKnown RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 TEX37Q96LM6 180 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 TUBA1CQ9BQE3 449 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 DERL2Q9GZP9 239 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 SEMA4BQ9NPR2 832 aaPredicted RBP12.22□□□□□ -0.45
NPC1-202ENST00000540608 ZNF510Q9Y2H8 683 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 NLRC5Q86WI3 1866 aa12.22□□□□□ -0.45
NPC1-202ENST00000540608 CCDC154A6NI56 674 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 SUPT3HB4E1H0 165 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 SUPT3HO75486 399 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 SLC22A3O75751 556 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
NPC1-202ENST00000540608 ITGB1P05556 798 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
NPC1-202ENST00000540608 HLA-DPA1P20036 260 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 PAX3P23760 479 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 PBX3P40426 434 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 TBX4P57082 545 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 ECT2LQ008S8 904 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 IL10RBQ08334 325 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 BTG3Q14201 252 aaPredicted RBP12.21□□□□□ -0.45
NPC1-202ENST00000540608 FUT11Q495W5 492 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 CCNYL2Q5T2Q4 361 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 TMEM199Q8N511 208 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 BIRC7Q96CA5 298 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 NUSAP1Q9BXS6 441 aaKnown RBP12.21□□□□□ -0.45
NPC1-202ENST00000540608 LEF1Q9UJU2 399 aaPredicted RBP12.21□□□□□ -0.45
NPC1-202ENST00000540608 RNF112Q9ULX5 631 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 TIMM22Q9Y584 194 aa12.21□□□□□ -0.45
NPC1-202ENST00000540608 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 H0YAE9 185 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 SNAP29O95721 258 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 EPOP01588 193 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 FGF1P05230 155 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 HTR1EP28566 365 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 HLCSP50747 726 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 STC1P52823 247 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 NAA20P61599 178 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 UFM1P61960 85 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.46
NPC1-202ENST00000540608 FXNQ16595 210 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 TYSND1Q2T9J0 566 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 ZNF829Q3KNS6 432 aaPredicted RBP12.21□□□□□ -0.46
NPC1-202ENST00000540608 GNASQ5JWF2 1037 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 NANOGP8Q6NSW7 305 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 PAQR3Q6TCH7 311 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 EFL1Q7Z2Z2 1120 aaKnown RBP12.21□□□□□ -0.46
NPC1-202ENST00000540608 MON1AQ86VX9 555 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 KIAA2013Q8IYS2 634 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 C2orf69Q8N8R5 385 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 LEMD2Q8NC56 503 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 OR13C4Q8NGS5 318 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 PNPT1Q8TCS8 783 aaKnown RBP12.21□□□□□ -0.46
NPC1-202ENST00000540608 OSCP1Q8WVF1 389 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.46
NPC1-202ENST00000540608 SLC30A3Q99726 388 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 SEMA3CQ99985 751 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 BRINP2Q9C0B6 783 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 NANOGQ9H9S0 305 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 RIMKLBQ9ULI2 386 aa12.21□□□□□ -0.46
NPC1-202ENST00000540608 ZFC3H1O60293 1989 aaKnown RBP12.21□□□□□ -0.46
NPC1-202ENST00000540608 LCHNA4D1U4 455 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 ECI2O75521 394 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 BAIAP3O94812 1187 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 NPPAP01160 153 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 RPS17P08708 135 aaKnown RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 RAB15P59190 212 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 FKBP1BP68106 108 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 EMX2Q04743 252 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 PDCD4Q53EL6 469 aaKnown RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 XKR7Q5GH72 579 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 BDH2Q9BUT1 245 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 CHID1Q9BWS9 393 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 C1QTNF3Q9BXJ4 246 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TMEM45AQ9NWC5 275 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TMEM9Q9P0T7 183 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 SCML2Q9UQR0 700 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TTC3P53804 2025 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TMX2-CTNND1H3BSU7 103 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 ZNF623O75123 536 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 GJB3O75712 270 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 RHOBTB1O94844 696 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 UROSP10746 265 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 CD52P31358 61 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 POLD3Q15054 466 aaPredicted RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 TBPL2Q6SJ96 375 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TMEM26Q6ZUK4 368 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 SCN4BQ8IWT1 228 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 TBC1D15Q8TC07 691 aa12.2□□□□□ -0.46
NPC1-202ENST00000540608 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
NPC1-202ENST00000540608 BORCS5Q969J3 196 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms