RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 CCL4L1Q8NHW4 92 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 PDXPQ96GD0 296 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 ALS2CR12Q96Q35 445 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 VAT1Q99536 393 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 FICDQ9BVA6 458 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 TEX101Q9BY14 249 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 BPIFA1Q9NP55 256 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 ARFGAP3Q9NP61 516 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 PIH1D1Q9NWS0 290 aaKnown RBP11.34□□□□□ -0.59
TMEM258-205ENST00000540434 TMEM98Q9Y2Y6 226 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 ZNF711Q9Y462 761 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 OAS3Q9Y6K5 1087 aaKnown RBP11.34□□□□□ -0.59
TMEM258-205ENST00000540434 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
TMEM258-205ENST00000540434 U3KQA8 63 aa11.34□□□□□ -0.59
TMEM258-205ENST00000540434 PSMD11O00231 422 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 FFAR2O15552 330 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 MAGEC1O60732 1142 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 CSO75390 466 aaKnown RBP11.33□□□□□ -0.6
TMEM258-205ENST00000540434 SLC4A1P02730 911 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 CEACAM5P06731 702 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 BPIP17213 487 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 GRIA1P42261 906 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 DPTQ07507 201 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 CLN3Q13286 438 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 C3orf38Q5JPI3 329 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 TTC27Q6P3X3 843 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 RD3Q7Z3Z2 195 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 PARGQ86W56 976 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 HEATR4Q86WZ0 1026 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 PTRH1Q86Y79 214 aaKnown RBP11.33□□□□□ -0.6
TMEM258-205ENST00000540434 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
TMEM258-205ENST00000540434 HID1Q8IV36 788 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 TTC13Q8NBP0 860 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 ZNF548Q8NEK5 533 aaPredicted RBP11.33□□□□□ -0.6
TMEM258-205ENST00000540434 AP2M1Q96CW1 435 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 RTP4Q96DX8 246 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 IFT43Q96FT9 208 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 PRR11Q96HE9 360 aaPredicted RBP11.33□□□□□ -0.6
TMEM258-205ENST00000540434 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 ARHGAP9Q9BRR9 750 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 LRRC61Q9BV99 259 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 ZFYVE1Q9HBF4 777 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 MAGEE1Q9HCI5 957 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 THSD1Q9NS62 852 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
TMEM258-205ENST00000540434 SPENQ96T58 3664 aaKnown RBP11.33□□□□□ -0.6
TMEM258-205ENST00000540434 ITPR2Q14571 2701 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GOLGA6CA6NDK9 693 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GOLGA6BA6NDN3 693 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GOLGA6L9A6NEM1 432 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GAPDHSO14556 408 aaPredicted RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 INPP4BO15327 924 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GPR39O43194 453 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 EPOP01588 193 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 HOXC4P09017 264 aaPredicted RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GOLGA6DP0CG33 693 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 TSHRP16473 764 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 ZNF30P17039 623 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 TPH1P17752 444 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 THOP1P52888 689 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 SRP54P61011 504 aaKnown RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 CDK3Q00526 305 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 MPP3Q13368 585 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 CCNG2Q16589 344 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 SKIDA1Q1XH10 827 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 DEFB133Q30KQ1 61 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 KHDC1Q4VXA5 237 aaKnown RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 PRRT3Q5FWE3 981 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 HENMT1Q5T8I9 393 aaKnown RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 ALS2CLQ60I27 953 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 FOXR1Q6PIV2 292 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 FAM174AQ8TBP5 190 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 LMX1AQ8TE12 382 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 COX14Q96I36 57 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 WDR92Q96MX6 357 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 DEPDC7Q96QD5 511 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 C1QTNF7Q9BXJ2 289 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 FRMD8Q9BZ67 464 aaPredicted RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 TMEM168Q9H0V1 697 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 SUDS3Q9H7L9 328 aaPredicted RBP11.32□□□□□ -0.6
TMEM258-205ENST00000540434 ETNK1Q9HBU6 452 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 GOLGA6AQ9NYA3 693 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 JRKLQ9Y4A0 524 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 ARL5AQ9Y689 179 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 CSMD1Q96PZ7 3565 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 NBASA2RRP1 2371 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 ICE1Q9Y2F5 2266 aa11.32□□□□□ -0.6
TMEM258-205ENST00000540434 CACNA1DQ01668 2161 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 CDRT15L2A8MXV6 281 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 CCL22O00626 93 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 YY2O15391 372 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 ZSCAN12O43309 604 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 AQP9O43315 295 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 NRDCO43847 1150 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 CKMT1AP12532 417 aa11.31□□□□□ -0.6
TMEM258-205ENST00000540434 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms