RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MCFD2Q8NI22 146 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 MOCOSQ96EN8 888 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF668Q96K58 619 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 NTPCRQ9BSD7 190 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 STRA6Q9BX79 667 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 FRMD8P1Q9BZ68 369 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 REXO4Q9GZR2 422 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 KMT5AQ9NQR1 393 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 ACSS2Q9NR19 701 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CHRAC1Q9NRG0 131 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 GLTPQ9NZD2 209 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 EIF3KQ9UBQ5 218 aaKnown RBP9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 CDYLQ9Y232 598 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
CTNNA1-243ENST00000540387 PABPN1LA6NDY0 278 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF99A8MXY4 864 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TSPAN4O14817 238 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 DNAJB5O75953 348 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 C22orf31O95567 290 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 APOA1P02647 267 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 CHRNA1P02708 482 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 IL7P13232 177 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ALOX12P18054 663 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ATICP31939 592 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 EVI2BP34910 448 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ABCG1P45844 678 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 PSEN2P49810 448 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 CBLBQ13191 982 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 REP15Q6BDI9 236 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 FAM171BQ6P995 826 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 SYCE2Q6PIF2 218 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TMEM161BQ8NDZ6 487 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 CEP19Q96LK0 163 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 RHOBTB2Q9BYZ6 727 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 NTN4Q9HB63 628 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 HMX1Q9NP08 348 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TEKT2Q9UIF3 430 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TMEM191CA6NGB0 347 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 AGAP5A6NIR3 686 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 HAS3O00219 553 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 PI15O43692 258 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 SMIM10L2AP0DMW4 78 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 SMIM10L2BP0DMW5 78 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 RPL17P18621 184 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 HDCP19113 662 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 PCMT1P22061 227 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 OXTRP30559 389 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 NOMO3P69849 1222 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 OGDHQ02218 1023 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 INPP5AQ14642 412 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 KCNA10Q16322 511 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 KCNT1Q5JUK3 1230 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 IER5Q5VY09 327 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 LAYNQ6UX15 382 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 DPY19L3Q6ZPD9 716 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 AMIGO1Q86WK6 493 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF677Q86XU0 584 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 SPPL2CQ8IUH8 684 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 SYTL1Q8IYJ3 562 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 GLB1L3Q8NCI6 653 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 KLHDC9Q8NEP7 349 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 OR4M1Q8NGD0 313 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 MCRS1Q96EZ8 462 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ASPSCR1Q9BZE9 553 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TRIM15Q9C019 465 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 ROGDIQ9GZN7 287 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TOR3AQ9H497 397 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 HPS4Q9NQG7 708 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 SNX5Q9Y5X3 404 aa9.42□□□□□ -0.9
CTNNA1-243ENST00000540387 TOR1AO14656 332 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ASGR1P07306 291 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ADRB2P07550 413 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 MAPTP10636 758 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 KRT20P35900 424 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 GGT5P36269 586 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 CCR10P46092 362 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 SOX9P48436 509 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ST13P50502 369 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 RPL14P50914 215 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC7A2P52569 658 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 MAPK12P53778 367 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 DEFA1P59665 94 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 DEFA3P59666 94 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 GTF2BQ00403 316 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF33BQ06732 778 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 STX5Q13190 355 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 TOP3AQ13472 1001 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PARP15Q460N3 678 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 LHX8Q68G74 356 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PM20D1Q6GTS8 502 aa9.41□□□□□ -0.9
CTNNA1-243ENST00000540387 PRSS48Q7RTY5 328 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms