RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TAS2R13Q9NYV9 303 aa13.57□□□□□ -0.24
BNIP3-202ENST00000540159 PTPRDP23468 1912 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 ADAMTS4O75173 837 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 NFE2Q16621 373 aaPredicted RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 ATXN7L2Q5T6C5 722 aaPredicted RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 TMEM214Q6NUQ4 689 aaKnown RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 SOCS4Q8WXH5 440 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 EFHD1Q9BUP0 239 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 TLR9Q9NR96 1032 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 ETAA1Q9NY74 926 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 PLK2Q9NYY3 685 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 TCRBV3S1A0A5B6 114 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 GIPC1O14908 333 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 HK3P52790 923 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 IL10RBQ08334 325 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 SLC44A4Q53GD3 710 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 TTC33Q6PID6 262 aaPredicted RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 ABTB1Q969K4 478 aaPredicted RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 FUBP1Q96AE4 644 aaKnown RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 MTFMTQ96DP5 389 aaKnown RBP13.56□□□□□ -0.24
BNIP3-202ENST00000540159 L3HYPDHQ96EM0 354 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 ZFYVE28Q9HCC9 887 aa13.56□□□□□ -0.24
BNIP3-202ENST00000540159 MTMR11A4FU01 709 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SEPT4O43236 478 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SNX2O60749 519 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 PRAMEF11O60813 436 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 HOXD9P28356 352 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 POLD2P49005 469 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 IST1P53990 364 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 KCNK10P57789 538 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 GNA12Q03113 381 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 TRIP4Q15650 581 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 CLVS1Q8IUQ0 354 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 FAM8A1Q9UBU6 413 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 Q9Y3F1 56 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ASPDHA6ND91 283 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 MAGEB3O15480 346 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SYNCRIPO60506 623 aaKnown RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ZNF189O75820 626 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 CYBBP04839 570 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 FGF1P05230 155 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ZNF23P17027 643 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 TYMPP19971 482 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 PSMA4P25789 261 aaKnown RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 STT3AP46977 705 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 GSK3BP49841 420 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 GALK1P51570 392 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 LIPEQ05469 1076 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 RAD51Q06609 339 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 LCP2Q13094 533 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 MILR1Q7Z6M3 343 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 PHYKPLQ8IUZ5 450 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 STAG3L4Q8TBR4 150 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ZNF597Q96LX8 424 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 KCTD14Q9BQ13 255 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ALG2Q9H553 416 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SCUBE2Q9NQ36 999 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 UBA2Q9UBT2 640 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 EBF1Q9UH73 591 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 CDC14AQ9UNH5 594 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 MYRFQ9Y2G1 1151 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 FCF1Q9Y324 198 aaKnown RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 PCDHB9Q9Y5E1 797 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SQORQ9Y6N5 450 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 K7ERQ8 282 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 H6PDO95479 791 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ASLP04424 464 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 CDH2P19022 906 aaPredicted RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 IL12AP29459 219 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 RPS6KA3P51812 740 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 OXCT1P55809 520 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 DYNC1I2Q13409 638 aaKnown RBP13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SELPLGQ14242 412 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 NCSTNQ92542 709 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ZNF696Q9H7X3 374 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 ZFP14Q9HCL3 533 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 PRM3Q9NNZ6 103 aa13.55□□□□□ -0.24
BNIP3-202ENST00000540159 CLGNO14967 610 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 OAZ2O95190 189 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 SNAP29O95721 258 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 NDST3O95803 873 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 C1RP00736 705 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 KLKB1P03952 638 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 HLA-DPA1P20036 260 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 NEDD8Q15843 81 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TMEM259Q4ZIN3 620 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 IL27RAQ6UWB1 636 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 ARHGAP22Q7Z5H3 698 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 KIAA2013Q8IYS2 634 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 PLEKHG4BQ96PX9 1271 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TBCDQ9BTW9 1192 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 RBM38Q9H0Z9 239 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms