RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ELMOD1Q8N336 334 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 OTUB1Q96FW1 271 aaPredicted RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 OR52B2Q96RD2 323 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 EPS8L2Q9H6S3 715 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CACNA2D2Q9NY47 1150 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 RAD51BO15315 384 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 MBL2P11226 248 aaPredicted RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 XRCC1P18887 633 aaPredicted RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CCNA2P20248 432 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CCNCP24863 283 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 TTKP33981 857 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 TUFMP49411 452 aaKnown RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CCR3P51677 355 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CLCN5P51795 746 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 MLLT6P55198 1093 aaPredicted RBP9.94□□□□□ -0.82
TRAF1-202ENST00000540010 XIAPP98170 497 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 IRF9Q00978 393 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 GALNT3Q14435 633 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF534Q76KX8 674 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 TREML1Q86YW5 311 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 CROCCP3Q8IVE0 287 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PGAM4Q8N0Y7 254 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 SPATA16Q9BXB7 569 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 NDEL1Q9GZM8 345 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 COQ10BQ9H8M1 238 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 OSER1Q9NX31 292 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 TPRKBQ9Y3C4 175 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 LRRC42Q9Y546 428 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PCDHB12Q9Y5F1 795 aa9.94□□□□□ -0.82
TRAF1-202ENST00000540010 PDCD11Q14690 1871 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TYROBPO43914 113 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 EPB42P16452 691 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 PRKCHP24723 683 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 HTR7P34969 479 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ABL2P42684 1182 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 THOP1P52888 689 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TAS2R39P59534 338 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 RPL38P63173 70 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 HSPA14Q0VDF9 509 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SMARCB1Q12824 385 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CPSF6Q16630 551 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 BROXQ5VW32 411 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 RTL3Q8N8U3 475 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 PSMA8Q8TAA3 256 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 BTN2A3PQ96KV6 586 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TM6SF2Q9BZW4 377 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 RAD21L1Q9H4I0 556 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ATAD3AQ9NVI7 634 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 H2AFY2Q9P0M6 372 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CASP8AP2Q9UKL3 1982 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TSC22D2O75157 780 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 IPO13O94829 963 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CST1P01037 141 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CYP4B1P13584 511 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 MSH3P20585 1137 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SOX6P35712 828 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CYP4F2P78329 520 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CYP4F3Q08477 520 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 BTG3Q14201 252 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 STXBP5Q5T5C0 1151 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TYW3Q6IPR3 259 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CDHR3Q6ZTQ4 885 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TAS1R1Q7RTX1 841 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 PRR11Q96HE9 360 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM175Q9BSA9 504 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CCSER2Q9H7U1 834 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 DYRK4Q9NR20 520 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 MARCH5Q9NX47 278 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 LEF1Q9UJU2 399 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SNX8Q9Y5X2 465 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 DGKBQ9Y6T7 804 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 DBTP11182 482 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TNK2Q07912 1038 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 DGUOKQ16854 277 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 POTEHQ6S545 545 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM173Q86WV6 379 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ELMO1Q92556 727 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 MED8Q96G25 268 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SLC39A3Q9BRY0 314 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 DHRS4Q9BTZ2 278 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 GLOD4Q9HC38 313 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 OPTCQ9UBM4 332 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TMCC3Q9ULS5 477 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TDRKHQ9Y2W6 561 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TDRD15B5MCY1 1934 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 FAM159BA6NKW6 160 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SLC38A8A6NNN8 435 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 MATN3O15232 486 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SNAP91O60641 907 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 MED26O95402 600 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF7P17097 686 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 GPC1P35052 558 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CHI3L1P36222 383 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ATP5C1P36542 298 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 BLVRAP53004 296 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CDH15P55291 814 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ALDH6A1Q02252 535 aaKnown RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 STARD3Q14849 445 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TRIP4Q15650 581 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms