RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OR10T2Q8NGX3 314 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 BPIFB1Q8TDL5 484 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 VPS33AQ96AX1 596 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
CDH13-204ENST00000539548 SLC39A13Q96H72 371 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 PLEKHA8Q96JA3 519 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 TMEM209Q96SK2 561 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 C1QTNF3Q9BXJ4 246 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 TRIM8Q9BZR9 551 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 ZYG11BQ9C0D3 744 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 SP110Q9HB58 689 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 NMUR1Q9HB89 426 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 NUDT5Q9UKK9 219 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 TLR6Q9Y2C9 796 aa9.61□□□□□ -0.87
CDH13-204ENST00000539548 TDRKHQ9Y2W6 561 aaKnown RBP9.61□□□□□ -0.87
CDH13-204ENST00000539548 MYO16Q9Y6X6 1858 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 A0A1B0GTL3 188 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 A0A1W2PQH9 124 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CCDC154A6NI56 674 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SUPT3HB4E1H0 165 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 H0Y858 1186 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SUPT3HO75486 399 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CRCPO75575 148 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 EPOP01588 193 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 RPS17P08708 135 aaKnown RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 HLA-DPA1P20036 260 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CD247P20963 164 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PAX3P23760 479 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 HRH2P25021 359 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 BRCC3P46736 316 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CD97P48960 835 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CPT1AP50416 773 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 POLR2JP52435 117 aaKnown RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 C21orf59P57076 290 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 UFM1P61960 85 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ECT2LQ008S8 904 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TUBA3CQ13748 450 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 XKR7Q5GH72 579 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ZNF773Q6PK81 442 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TBPL2Q6SJ96 375 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 FAM43BQ6ZT52 329 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 CPNE9Q8IYJ1 553 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 THEM5Q8N1Q8 247 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SFRP1Q8N474 314 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 OR4L1Q8NH43 312 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 BRSK1Q8TDC3 778 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PSMG2Q969U7 264 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TEX37Q96LM6 180 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CHID1Q9BWS9 393 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 NAA50Q9GZZ1 169 aaKnown RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 SEMA4BQ9NPR2 832 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 PFDN4Q9NQP4 134 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TLR9Q9NR96 1032 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CATSPERZQ9NTU4 200 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDH13-204ENST00000539548 ZIM2Q9NZV7 527 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 GMIPQ9P107 970 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SLC30A1Q9Y6M5 507 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 BPTFQ12830 3046 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 FAM234BA2RU67 622 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 LCHNA4D1U4 455 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 IQCA1LA6NCM1 817 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 STX16O14662 325 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 KLK8O60259 260 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 NOL3O60936 208 aaKnown RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 SEC14L2O76054 403 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 B3GAT3O94766 335 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CNTN5O94779 1100 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 BAIAP3O94812 1187 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PRSS23O95084 383 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ESRRBO95718 433 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ALBP02768 609 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 FGF1P05230 155 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ENO2P09104 434 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 UROSP10746 265 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 MBL2P11226 248 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 GRIK1P39086 918 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PBX3P40426 434 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 STC1P52823 247 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TSPY1Q01534 308 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 IL10RBQ08334 325 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SPIDRQ14159 915 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PTPRCAPQ14761 206 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PLCL1Q15111 1095 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 CRY1Q16526 586 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TYSND1Q2T9J0 566 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 FUT11Q495W5 492 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SETMARQ53H47 684 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 IL31Q6EBC2 164 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 OVOS1Q6IE37 1185 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TAF2Q6P1X5 1199 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 XKR5Q6UX68 686 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 PRR23BQ6ZRT6 265 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 TFAP2DQ7Z6R9 452 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 ANKRD23Q86SG2 305 aa9.6□□□□□ -0.87
CDH13-204ENST00000539548 SPATA2LQ8IUW3 424 aaPredicted RBP9.6□□□□□ -0.87
CDH13-204ENST00000539548 HID1Q8IV36 788 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms