RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 ZFP28Q8NHY6 868 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 WRAP53Q9BUR4 548 aaKnown RBP10.02□□□□□ -0.81
GGA3-201ENST00000537686 OSBPL7Q9BZF2 842 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 EPB41L4BQ9H329 900 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 PHPT1Q9NRX4 125 aaPredicted RBP10.02□□□□□ -0.81
GGA3-201ENST00000537686 ZNF358Q9NW07 568 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 SOHLH2Q9NX45 425 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 CNTN3Q9P232 1028 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 RPS6KA6Q9UK32 745 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 SLC27A6Q9Y2P4 619 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 STYXL1Q9Y6J8 313 aa10.02□□□□□ -0.81
GGA3-201ENST00000537686 NEMP2A6NFY4 417 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 UNCXA6NJT0 531 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 UMPSP11172 480 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 VAV1P15498 845 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 RPL3P39023 403 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 SSR2P43308 183 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 MLLT6P55198 1093 aaPredicted RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 CYP4F2P78329 520 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CYP4F8P98187 520 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CACNG1Q06432 222 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 BNIP2Q12982 314 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 MRPL28Q13084 256 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 KIAA0930Q6ICG6 404 aaPredicted RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 CAPN13Q6MZZ7 669 aaPredicted RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 SVOPQ8N4V2 548 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZNF781Q8N8C0 355 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 HEXDCQ8WVB3 486 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TRAPPC9Q96Q05 1148 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 FCRL5Q96RD9 977 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TCF12Q99081 682 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TCF25Q9BQ70 676 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 SLC17A6Q9P2U8 582 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 Q9Y3F1 56 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 A0A1W2PRU2 124 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 GSAPA4D1B5 854 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 UBXN8O00124 270 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 AOC2O75106 756 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 RNASEH2AO75792 299 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 DLGAP3O95886 979 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 RXRGP48443 463 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TNK2Q07912 1038 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 PPIDQ08752 370 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 RALGDSQ12967 914 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 BNIP1Q12981 228 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 USP39Q53GS9 565 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 NCBP2-AS2Q69YL0 99 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 PSRC1Q6PGN9 363 aaPredicted RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 SERPINA9Q86WD7 417 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CCDC103Q8IW40 242 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 OFCC1Q8IZS5 231 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CPSF7Q8N684 471 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 BANPQ8N9N5 519 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 OR2T12Q8NG77 320 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TWIST2Q8WVJ9 160 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 RNFT2Q96EX2 444 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 NOL11Q9H8H0 719 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 EIF2B3Q9NR50 452 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 DNAJC11Q9NVH1 559 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 GDAP2Q9NXN4 497 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CD84Q9UIB8 345 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZNF490Q9ULM2 529 aaPredicted RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 RPL26L1Q9UNX3 145 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 SLC45A1Q9Y2W3 748 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 COPG1Q9Y678 874 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 A0A1W2PQ67 120 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 OR51F1A6NGY5 319 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 NDUFB5O43674 189 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ATG13O75143 517 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CNMDO75829 334 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TGDSO95455 350 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 IFNA16P05015 189 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 GJA1P17302 382 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 PTPN2P17706 415 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 FOXN2P32314 431 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CLCQ05315 142 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 EPS8Q12929 822 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 LCP2Q13094 533 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 PPIGQ13427 754 aaKnown RBP eCLIP10.01□□□□□ -0.814e-7■■■□□ 17.7
GGA3-201ENST00000537686 GNA13Q14344 377 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ADGRF1Q5T601 910 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 IL23RQ5VWK5 629 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 B3GNT9Q6UX72 402 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TMC5Q6UXY8 1006 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZYG11AQ6WRX3 759 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 TAS1R3Q7RTX0 852 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZNF605Q86T29 641 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 MPP5Q8N3R9 675 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZCCHC7Q8N3Z6 543 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 BPIFB6Q8NFQ5 453 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 LMO3Q8TAP4 145 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 NELL1Q92832 810 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 SLCO2A1Q92959 643 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 FEM1CQ96JP0 617 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 ZFRQ96KR1 1074 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 PAIP1Q9H074 479 aaKnown RBP10.01□□□□□ -0.81
GGA3-201ENST00000537686 MFSD1Q9H3U5 465 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 CCSER2Q9H7U1 834 aa10.01□□□□□ -0.81
GGA3-201ENST00000537686 LRTM1Q9HBL6 345 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms