RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 HAND2P61296 217 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 MRPS6P82932 125 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 SP4Q02446 784 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 PPFIA1Q13136 1202 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 BIRC2Q13490 618 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 CUL4BQ13620 913 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 ALKBH1Q13686 389 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 SMAD1Q15797 465 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 TMEM266Q2M3C6 531 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 GXYLT1Q4G148 440 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 RARS2Q5T160 578 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 SPOUT1Q5T280 376 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 GPATCH4Q5T3I0 446 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 METTL7BQ6UX53 244 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 ZNF517Q6ZMY9 492 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 ZDHHC17Q8IUH5 632 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 TBC1D10CQ8IV04 446 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 THNSL1Q8IYQ7 743 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 SLC25A41Q8N5S1 370 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 PTGR2Q8N8N7 351 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 TDRD5Q8NAT2 981 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 SUMF1Q8NBK3 374 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 OR6Y1Q8NGX8 325 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 RUBCNQ92622 972 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 GOLGA1Q92805 767 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 NECTIN4Q96NY8 510 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 ARPC5LQ9BPX5 153 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 MAF1Q9H063 256 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 FAM49AQ9H0Q0 323 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 TASP1Q9H6P5 420 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 CWH43Q9H720 699 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 JMJD4Q9H9V9 463 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 PTPRHQ9HD43 1115 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 PNRC2Q9NPJ4 139 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 ENTPD7Q9NQZ7 604 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 SIRT3Q9NTG7 399 aaPredicted RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 TUBE1Q9UJT0 475 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 PADI3Q9ULW8 664 aa5.68□□□□□ -1.5
CLIP1-207ENST00000536634 MRPL11Q9Y3B7 192 aaKnown RBP5.68□□□□□ -1.5
CLIP1-207ENST00000536634 PEX14O75381 377 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 DCNP07585 359 aaKnown RBP5.67□□□□□ -1.5
CLIP1-207ENST00000536634 CSF1P09603 554 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 SP9P0CG40 484 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 STAG3L1P0CL83 205 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 CCND2P30279 289 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 PLK5Q496M5 336 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 VWA5B1Q5TIE3 1220 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 CES5AQ6NT32 575 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 RINLQ6ZS11 566 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 TRAPPC12Q8WVT3 735 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 MRPS27Q92552 414 aaKnown RBP5.67□□□□□ -1.5
CLIP1-207ENST00000536634 CASP10Q92851 521 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 INPP4AQ96PE3 977 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-207ENST00000536634 RTP3Q9BQQ7 232 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 FTHL17Q9BXU8 183 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 RMI1Q9H9A7 625 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 VAT1LQ9HCJ6 419 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 TMLHEQ9NVH6 421 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 TBC1D14Q9P2M4 693 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 KLQ9UEF7 1012 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 ZNF215Q9UL58 517 aaPredicted RBP5.67□□□□□ -1.5
CLIP1-207ENST00000536634 DUSP12Q9UNI6 340 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 COMMD10Q9Y6G5 202 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 NEDD4P46934 1319 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 FRMPD4Q14CM0 1322 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 IGSF9BQ9UPX0 1349 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 LAMA4Q16363 1823 aa5.67□□□□□ -1.5
CLIP1-207ENST00000536634 HELZ2Q9BYK8 2649 aaKnown RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 EVPLQ92817 2033 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 TNFRSF13BO14836 293 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 EIF5BO60841 1220 aaKnown RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 FAM155BO75949 473 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 GLULP15104 373 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 EPCAMP16422 314 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 GSTM2P28161 218 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 TNFSF8P32971 234 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 TCF7P36402 384 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 MTHFRP42898 656 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 CYP2J2P51589 502 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 TDGQ13569 410 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 PKP1Q13835 747 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 NEDD9Q14511 834 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 ALX1Q15699 326 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 SPECC1Q5M775 1068 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 WASHC2DQ5SRD0 308 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 FAM171A1Q5VUB5 890 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 AAGABQ6PD74 315 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 MAML2Q8IZL2 1156 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 GALNT15Q8N3T1 639 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 FSIP1Q8NA03 581 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 KDM1BQ8NB78 822 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 RILPL2Q969X0 211 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 KTI12Q96EK9 354 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 TTC14Q96N46 770 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 ACTR5Q9H9F9 607 aaPredicted RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 MRPL44Q9H9J2 332 aaKnown RBP5.66□□□□□ -1.5
CLIP1-207ENST00000536634 SAYSD1Q9NPB0 183 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 DLGAP2Q9P1A6 1054 aa5.66□□□□□ -1.5
CLIP1-207ENST00000536634 TRPV2Q9Y5S1 764 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms