RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 CCDC172P0C7W6 258 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 TYRP1P17643 537 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 SEPHS1P49903 392 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 PMS2P54278 862 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 UBE2IP63279 158 aaKnown RBP14.76□□□□□ -0.05
CTSB-230ENST00000534149 IHHQ14623 411 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 ESPL1Q14674 2120 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 CAPRIN2Q6IMN6 1127 aaKnown RBP14.76□□□□□ -0.05
CTSB-230ENST00000534149 PPP1R2P3Q6NXS1 205 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 IRF2BP2Q7Z5L9 587 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 TGM7Q96PF1 710 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 OR6C1Q96RD1 312 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 ERGIC2Q96RQ1 377 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.76□□□□□ -0.05
CTSB-230ENST00000534149 VPS4AQ9UN37 437 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 CHKBQ9Y259 395 aa14.76□□□□□ -0.05
CTSB-230ENST00000534149 CACNA1DQ01668 2161 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 TTLL8A6PVC2 850 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 DNAJB5O75953 348 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 NDUFA10O95299 355 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 ATP1A3P13637 1013 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 SERPINB6P35237 376 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 DSC2Q02487 901 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 FHL5Q5TD97 284 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 PHYKPLQ8IUZ5 450 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 RASGRP3Q8IV61 690 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 TEX26Q8N6G2 289 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 EFCAB3Q8N7B9 438 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 ZNF653Q96CK0 615 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 PLEKHG4BQ96PX9 1271 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
CTSB-230ENST00000534149 TWSG1Q9GZX9 223 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 OSGEPL1Q9H4B0 414 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 RMI1Q9H9A7 625 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 ARFGAP3Q9NP61 516 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 SCHIP1Q9P0W5 487 aaPredicted RBP14.75□□□□□ -0.05
CTSB-230ENST00000534149 LIMA1Q9UHB6 759 aaKnown RBP14.75□□□□□ -0.05
CTSB-230ENST00000534149 LNPEPQ9UIQ6 1025 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 SLC30A1Q9Y6M5 507 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 SHANK1Q9Y566 2161 aa14.75□□□□□ -0.05
CTSB-230ENST00000534149 PIPSLA2A3N6 862 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 OR5K4A6NMS3 321 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 GRID2O43424 1007 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 NUAK1O60285 661 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 CREG1O75629 220 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 UBXN7O94888 489 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 FTLP02792 175 aaPredicted RBP14.74□□□□□ -0.05
CTSB-230ENST00000534149 PCK1P35558 622 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 LEPRP48357 1165 aaKnown RBP14.74□□□□□ -0.05
CTSB-230ENST00000534149 DNASE1L3Q13609 305 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 HENMT1Q5T8I9 393 aaKnown RBP14.74□□□□□ -0.05
CTSB-230ENST00000534149 TXNRD3NBQ6F5E7 133 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 TMEM26Q6ZUK4 368 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 AVL9Q8NBF6 648 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 GALNT11Q8NCW6 608 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 LPCAT1Q8NF37 534 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 ANKRD20A12PQ8NF67 263 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 CPT1CQ8TCG5 803 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 TDRD1Q9BXT4 1180 aaKnown RBP14.74□□□□□ -0.05
CTSB-230ENST00000534149 TRIM55Q9BYV6 548 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 ZNF768Q9H5H4 540 aaKnown RBP14.74□□□□□ -0.05
CTSB-230ENST00000534149 KLC4Q9NSK0 619 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 RCOR3Q9P2K3 495 aaPredicted RBP14.74□□□□□ -0.05
CTSB-230ENST00000534149 ATXN10Q9UBB4 475 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 MYO1AQ9UBC5 1043 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 KCND3Q9UK17 655 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 DNPEPQ9ULA0 475 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 TTLL3Q9Y4R7 772 aa14.74□□□□□ -0.05
CTSB-230ENST00000534149 ITPR2Q14571 2701 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 C1orf232A0A0U1RR37 186 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 SPAG6O75602 509 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 RASSF9O75901 435 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 PRLP01236 227 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 RNF224P0DH78 156 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 RARAP10276 462 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 ZNF8P17098 575 aaPredicted RBP14.73□□□□□ -0.05
CTSB-230ENST00000534149 AMD1P17707 334 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 CASP14P31944 242 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 SPINT3P49223 89 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 IL11RAQ14626 422 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 PLA2G4EQ3MJ16 856 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 ZNF648Q5T619 568 aaPredicted RBP14.73□□□□□ -0.05
CTSB-230ENST00000534149 TRIM48Q8IWZ4 208 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 SSC4DQ8WTU2 575 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 CT55Q8WUE5 264 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 CARD9Q9H257 536 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 FAM83DQ9H4H8 585 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 UCK1Q9HA47 277 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 PCDH18Q9HCL0 1135 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 PCDHGA6Q9Y5G7 932 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 SCINQ9Y6U3 715 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 MED13Q9UHV7 2174 aa14.73□□□□□ -0.05
CTSB-230ENST00000534149 HIVEP3Q5T1R4 2406 aa14.72□□□□□ -0.05
CTSB-230ENST00000534149 TOX3O15405 576 aaPredicted RBP14.72□□□□□ -0.05
CTSB-230ENST00000534149 KIF1CO43896 1103 aaKnown RBP14.72□□□□□ -0.05
CTSB-230ENST00000534149 MFSD11O43934 449 aa14.72□□□□□ -0.05
CTSB-230ENST00000534149 SEMA7AO75326 666 aa14.72□□□□□ -0.05
CTSB-230ENST00000534149 VIPP01282 170 aa14.72□□□□□ -0.05
CTSB-230ENST00000534149 CCNYL3P0C7X3 344 aa14.72□□□□□ -0.05
CTSB-230ENST00000534149 GARSP41250 739 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms