RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PADI4Q9UM07 663 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 SNX12Q9UMY4 172 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 KCTD3Q9Y597 815 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 BPTFQ12830 3046 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 CHUKO15111 745 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 LDB2O43679 373 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 CRTAMO95727 393 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 ZSCAN5DPP0CG00 497 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 ZNF8P17098 575 aaPredicted RBP20.24■□□□□ 0.83
CCS-208ENST00000533244 AK4P27144 223 aaPredicted RBP20.24■□□□□ 0.83
CCS-208ENST00000533244 RPL22P35268 128 aaKnown RBP20.24■□□□□ 0.83
CCS-208ENST00000533244 ACTN2P35609 894 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 KCNJ1P48048 391 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 PDE1BQ01064 536 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 CHRNA6Q15825 494 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 KHDC1Q4VXA5 237 aaKnown RBP20.24■□□□□ 0.83
CCS-208ENST00000533244 FAM151BQ6UXP7 276 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 EFL1Q7Z2Z2 1120 aaKnown RBP20.24■□□□□ 0.83
CCS-208ENST00000533244 LINC00523Q86TU6 105 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 OR4K2Q8NGD2 314 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 COG1Q8WTW3 980 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 ARFGAP3Q9NP61 516 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 RAB6BQ9NRW1 208 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 SMOXQ9NWM0 555 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 TAAR2Q9P1P5 351 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 SIRPGQ9P1W8 387 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 PLEKHM1Q9Y4G2 1056 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 GPSM3Q9Y4H4 160 aa20.24■□□□□ 0.83
CCS-208ENST00000533244 COL27A1Q8IZC6 1860 aaPredicted RBP20.24■□□□□ 0.83
CCS-208ENST00000533244 CPED1A4D0V7 1026 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 OPA1O60313 960 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 RP1P56715 2156 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 XIAPP98170 497 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 CYP1B1Q16678 543 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 PERM1Q5SV97 790 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 ZNF648Q5T619 568 aaPredicted RBP20.23■□□□□ 0.83
CCS-208ENST00000533244 HES3Q5TGS1 186 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 C4orf22Q6V702 233 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 SFTPA2Q8IWL1 248 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 ACTRT1Q8TDG2 376 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 OR2AG1Q9H205 316 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 DPEP2Q9H4A9 486 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 GULP1Q9UBP9 304 aa20.23■□□□□ 0.83
CCS-208ENST00000533244 ZFC3H1O60293 1989 aaKnown RBP20.23■□□□□ 0.83
CCS-208ENST00000533244 FRYQ5TBA9 3013 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 PGRMC1O00264 195 aaKnown RBP20.22■□□□□ 0.83
CCS-208ENST00000533244 GPR39O43194 453 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 VEGFDO43915 354 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 PSMA3P25788 255 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 CA5AP35218 305 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 CLDN6P56747 220 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 ITGA9Q13797 1035 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 HLTFQ14527 1009 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCS-208ENST00000533244 C14orf28Q4W4Y0 310 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 CDCP2Q5VXM1 449 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 DDHD1Q8NEL9 900 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 OR6C4Q8NGE1 309 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 OR13C4Q8NGS5 318 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 NAP1L3Q99457 506 aaPredicted RBP20.22■□□□□ 0.83
CCS-208ENST00000533244 FKBPLQ9UIM3 349 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 APPL1Q9UKG1 709 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 PRKAB1Q9Y478 270 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 KNTC1P50748 2209 aa20.22■□□□□ 0.83
CCS-208ENST00000533244 ASPMQ8IZT6 3477 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 AGAP14A8MT82 685 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 B4DGG1 531 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 GRID2O43424 1007 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A9O60656 530 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 MTX2O75431 263 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 PRAMEF1O95521 474 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 TPH1P17752 444 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A6P19224 532 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A1P22309 533 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A4P22310 534 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A3P35503 534 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A5P35504 534 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 ACTR1BP42025 376 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 ACTR1AP61163 376 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 CDH17Q12864 832 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 CAMK2BQ13554 666 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 PEX6Q13608 980 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 CERCAMQ5T4B2 595 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 TTC27Q6P3X3 843 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 SLC30A9Q6PML9 568 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 DCBLD1Q8N8Z6 715 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 OR52K1Q8NGK4 314 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 ZDHHC1Q8WTX9 485 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A7Q9HAW7 530 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A10Q9HAW8 530 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 UGT1A8Q9HAW9 530 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 EIF2B3Q9NR50 452 aaKnown RBP20.21■□□□□ 0.83
CCS-208ENST00000533244 ZNHIT2Q9UHR6 403 aa20.21■□□□□ 0.83
CCS-208ENST00000533244 H7C0S8 307 aa20.2■□□□□ 0.82
CCS-208ENST00000533244 SRP72O76094 671 aaKnown RBP20.2■□□□□ 0.82
CCS-208ENST00000533244 HADHAP40939 763 aa20.2■□□□□ 0.82
CCS-208ENST00000533244 CHST15Q7LFX5 561 aaPredicted RBP20.2■□□□□ 0.82
CCS-208ENST00000533244 MARCH9Q86YJ5 346 aa20.2■□□□□ 0.82
CCS-208ENST00000533244 ZNF547Q8IVP9 402 aa20.2■□□□□ 0.82
CCS-208ENST00000533244 NAGSQ8N159 534 aa20.2■□□□□ 0.82
CCS-208ENST00000533244 MAPK15Q8TD08 544 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms