RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ACVR1Q04771 509 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 SUZ12Q15022 739 aaKnown RBP22.08■■□□□ 1.13
LRRK1-208ENST00000532029 SHBQ15464 509 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 HIF1AQ16665 826 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 BBS9Q3SYG4 887 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 LDLRAP1Q5SW96 308 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 AFTPHQ6ULP2 937 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 OR6P1Q8NGX9 317 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 PDXPQ96GD0 296 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 TRIM39Q9HCM9 518 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 ARFGAP3Q9NP61 516 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 MRPL40Q9NQ50 206 aaKnown RBP22.08■■□□□ 1.13
LRRK1-208ENST00000532029 SLC17A4Q9Y2C5 497 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 OAS3Q9Y6K5 1087 aaKnown RBP22.08■■□□□ 1.13
LRRK1-208ENST00000532029 TP53BP1Q12888 1972 aaPredicted RBP22.08■■□□□ 1.12
LRRK1-208ENST00000532029 CCDC162PA2VCL2 907 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 GPR39O43194 453 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 SDC3O75056 442 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 CTSEP14091 401 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 NMBRP28336 390 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 POLD2P49005 469 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 CAV1Q03135 178 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 CACNG1Q06432 222 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 DHX9Q08211 1270 aaKnown RBP22.07■■□□□ 1.12
LRRK1-208ENST00000532029 GPR33Q49SQ1 333 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 FNBP1LQ5T0N5 605 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 MARK2Q7KZI7 788 aaKnown RBP22.07■■□□□ 1.12
LRRK1-208ENST00000532029 TAS2R42Q7RTR8 314 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 RBFAQ8N0V3 343 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 NETO1Q8TDF5 533 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.07■■□□□ 1.12
LRRK1-208ENST00000532029 STAMBPL1Q96FJ0 436 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 SIGLEC10Q96LC7 697 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 TTC25Q96NG3 672 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 ZCCHC2Q9C0B9 1178 aaKnown RBP22.07■■□□□ 1.12
LRRK1-208ENST00000532029 FAM96AQ9H5X1 160 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 CARS2Q9HA77 564 aaKnown RBP22.07■■□□□ 1.12
LRRK1-208ENST00000532029 TREX1Q9NSU2 369 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 GRHL1Q9NZI5 618 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 SPASTQ9UBP0 616 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 KLF15Q9UIH9 416 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 TMPRSS11EQ9UL52 423 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 DGKBQ9Y6T7 804 aa22.07■■□□□ 1.12
LRRK1-208ENST00000532029 ZNF106Q9H2Y7 1883 aaKnown RBP22.07■■□□□ 1.12
LRRK1-208ENST00000532029 EP300Q09472 2414 aaPredicted RBP22.06■■□□□ 1.12
LRRK1-208ENST00000532029 FAM237BA0A1B0GVD1 139 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 VEGFDO43915 354 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 PIAS2O75928 621 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 IVLP07476 585 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 PAMP19021 973 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 GNPDA1P46926 289 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 LIMK1P53667 647 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 DRG2P55039 364 aaKnown RBP22.06■■□□□ 1.12
LRRK1-208ENST00000532029 GUCY2DQ02846 1103 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 BNIP3Q12983 259 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 SLC14A1Q13336 389 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 GTF2H3Q13889 308 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 ZNF648Q5T619 568 aaPredicted RBP22.06■■□□□ 1.12
LRRK1-208ENST00000532029 GPRC6AQ5T6X5 926 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 CES3Q6UWW8 571 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 DDHD1Q8NEL9 900 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 OR4L1Q8NH43 312 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 ZNF669Q96BR6 464 aaPredicted RBP22.06■■□□□ 1.12
LRRK1-208ENST00000532029 MFSD3Q96ES6 412 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 OR2AG1Q9H205 316 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 TCEAL2Q9H3H9 227 aaPredicted RBP22.06■■□□□ 1.12
LRRK1-208ENST00000532029 ATXN10Q9UBB4 475 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 PNMA8BQ9ULN7 279 aaPredicted RBP22.06■■□□□ 1.12
LRRK1-208ENST00000532029 SUFUQ9UMX1 484 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 PCDHGB2Q9Y5G2 931 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 TMEM131Q92545 1883 aa22.06■■□□□ 1.12
LRRK1-208ENST00000532029 OR51F1A6NGY5 319 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 SCAMP1O15126 338 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 PCDHGA12O60330 932 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 MTX2O75431 263 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 GOT2P00505 430 aaKnown RBP22.05■■□□□ 1.12
LRRK1-208ENST00000532029 MSH3P20585 1137 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 AKT1P31749 480 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 PLTPP55058 493 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 FASTKD1Q53R41 847 aaKnown RBP22.05■■□□□ 1.12
LRRK1-208ENST00000532029 PRRT3Q5FWE3 981 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 KCTD16Q68DU8 428 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 ADGRG6Q86SQ4 1221 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 GATAD2AQ86YP4 633 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 GALNT13Q8IUC8 556 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 NXPE1Q8N323 547 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 LMX1AQ8TE12 382 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 SAP25Q8TEE9 199 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 PWWP2AQ96N64 755 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 RMI1Q9H9A7 625 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 RPS6KL1Q9Y6S9 549 aa22.05■■□□□ 1.12
LRRK1-208ENST00000532029 ESYT3A0FGR9 886 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 AGAP14A8MT82 685 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 GPR89AB7ZAQ6 455 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 TP73O15350 636 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 AQP9O43315 295 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 CDK14O94921 469 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 POLBP06746 335 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 GPR89BP0CG08 455 aa22.04■■□□□ 1.12
LRRK1-208ENST00000532029 PGAM1P18669 254 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms